RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FANCD2OSQ96PS1 177 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 GMLQ99445 158 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 NOC4LQ9BVI4 516 aaKnown RBP6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 KRT82Q9NSB4 513 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 PAG1Q9NWQ8 432 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 TLR6Q9Y2C9 796 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 WDR90Q96KV7 1748 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 ZNF646O15015 1829 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 ZNF541Q9H0D2 1346 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 DCDC2CA8MYV0 355 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 ZFYP08048 801 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 RAB6AP20340 208 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 ZNF280AP59817 542 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 CHAF1AQ13111 956 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 INPP5AQ14642 412 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 ZC3H12AQ5D1E8 599 aaKnown RBP6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 TTBK2Q6IQ55 1244 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 HHIPL2Q6UWX4 724 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 HS2ST1Q7LGA3 356 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 UBE3DQ7Z6J8 389 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 PNMA8AQ86V59 439 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 C12orf40Q86WS4 652 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 C16orf71Q8IYS4 520 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 CNTROBQ8N137 903 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 PI4K2BQ8TCG2 481 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 EZH1Q92800 747 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 GAL3ST3Q96A11 431 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 EVI5LQ96CN4 794 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 BOLA2Q9H3K6 86 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 SEMA6CQ9H3T2 930 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 ACSS3Q9H6R3 686 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 GPRC5DQ9NZD1 345 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 LRP2BPQ9P2M1 347 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 CNOT7Q9UIV1 285 aaKnown RBP6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 MYH7P12883 1935 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 DOCK2Q92608 1830 aa6.6□□□□□ -1.35
HMGB1P44-201ENST00000508597 RFX7Q2KHR2 1363 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 AK9Q5TCS8 1911 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 MYH2Q9UKX2 1941 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 HIP1O00291 1037 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 DDNO94850 711 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 MED26O95402 600 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 VEGFAP15692 232 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 TFE3P19532 575 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 ERCC5P28715 1186 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 GMPSP49915 693 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 ID3Q02535 119 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 NFIAQ12857 509 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 TTLL4Q14679 1199 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 NFKBIBQ15653 356 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 RNF43Q68DV7 783 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 LLGL2Q6P1M3 1020 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 SEZ6L2Q6UXD5 910 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 USP50Q70EL3 339 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 ERMP1Q7Z2K6 904 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 DZIP1Q86YF9 867 aaKnown RBP6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 NT5DC4Q86YG4 428 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 KBTBD3Q8NAB2 608 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 GATA6Q92908 595 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 TEKT1Q969V4 418 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 MFSD14AQ96MC6 490 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 DNAJC2Q99543 621 aaKnown RBP6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 EMILIN2Q9BXX0 1053 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 TGIF2Q9GZN2 237 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 KCNQ5Q9NR82 932 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 ADARB2Q9NS39 739 aaKnown RBP6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 ABCF2Q9UG63 623 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 HACL1Q9UJ83 578 aa6.59□□□□□ -1.35
HMGB1P44-201ENST00000508597 COL1A1P02452 1464 aaPredicted RBP6.59□□□□□ -1.36
HMGB1P44-201ENST00000508597 SYNGAP1Q96PV0 1343 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 FAM95CA0A1B0GW59 222 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 GOLIM4O00461 696 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 MYO1BO43795 1136 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 EIF4EBP3O60516 100 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 EIF5BO60841 1220 aaKnown RBP6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 BAG3O95817 575 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 IGLV1-40P01703 118 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 PRDX5P30044 214 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 NTF4P34130 210 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 LIG3P49916 1009 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 SEPT6Q14141 434 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 UBE3CQ15386 1083 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 DLGAP5Q15398 846 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 BMP2KLQ5H9B9 411 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 PPM1JQ5JR12 505 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 XP32Q5T750 250 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 TTC22Q5TAA0 569 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 NAA16Q6N069 864 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 KIAA0825Q8IV33 1275 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 CERS5Q8N5B7 392 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 OTUD7AQ8TE49 926 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 NSUN4Q96CB9 384 aaKnown RBP6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 ZDHHC15Q96MV8 337 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 NOL10Q9BSC4 688 aaKnown RBP6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 MYOZ2Q9NPC6 264 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 C1GALT1Q9NS00 363 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 RAI14Q9P0K7 980 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 CYP8B1Q9UNU6 501 aa6.58□□□□□ -1.36
HMGB1P44-201ENST00000508597 MYO5AQ9Y4I1 1855 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms