RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 UBE3CQ15386 1083 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 FSCBQ5H9T9 825 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 RCSD1Q6JBY9 416 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 TRPM8Q7Z2W7 1104 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 WDR75Q8IWA0 830 aaKnown RBP7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 TEKT4Q8WW24 435 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 LARP4BQ92615 738 aaKnown RBP7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.9□□□□□ -1.155e-7■■■■□ 24.9
UBE2D3-224ENST00000508474 CD248Q9HCU0 757 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 IL1RAPL1Q9NZN1 696 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 ARPP21Q9UBL0 812 aaPredicted RBP7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 TBK1Q9UHD2 729 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 SNX12Q9UMY4 172 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 MAP3K19Q56UN5 1328 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 MROH5Q6ZUA9 1318 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 NEURL1BA8MQ27 555 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 ATP1A1P05023 1023 aaKnown RBP7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 SERPINB4P48594 390 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 STAT2P52630 851 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 MFAP3P55082 362 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 PPP4R3CPQ6ZMV5 832 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 GRAMD1CQ8IYS0 662 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 FAM133AQ8N9E0 248 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 ZNF653Q96CK0 615 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 EDC3Q96F86 508 aaKnown RBP7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 XPO6Q96QU8 1125 aaKnown RBP7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 KIF9Q9HAQ2 790 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 CPSF1Q10570 1443 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 RASA4BC9J798 803 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 ARHGEF9O43307 516 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 RASA4O43374 803 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 KDM1AO60341 852 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 GSTA1P08263 222 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 PLS3P13797 630 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 ITGA6P23229 1130 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 NSFP46459 744 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 HDAC4P56524 1084 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 NOP14P78316 857 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 MED21Q13503 144 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 ART3Q13508 389 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 NAIF1Q69YI7 327 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 JADE1Q6IE81 842 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 OTUD6AQ7L8S5 288 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 ZNF354CQ86Y25 554 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 PI4K2BQ8TCG2 481 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 NSMCE1Q8WV22 266 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 EDEM3Q9BZQ6 932 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 BAG5Q9UL15 447 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 A0A0G2JND7 137 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 MAGEA13PA6NCF6 341 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 C6orf229H3BNL8 230 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 PSMD14O00487 310 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 EEF1B2P24534 225 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 CHRNA3P32297 505 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 CTCFP49711 727 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 TMED10P49755 219 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 TOB2Q14106 344 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 DHX34Q14147 1143 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 KPNB1Q14974 876 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 ALKBH5Q6P6C2 394 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 DPH6Q7L8W6 267 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 MMGT1Q8N4V1 131 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 MAML1Q92585 1016 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 PALMDQ9NP74 551 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 SENP1Q9P0U3 644 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 NDUFB9Q9Y6M9 179 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 TNKSO95271 1327 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 CCDC22O60826 627 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 STAM2O75886 525 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 GGPS1O95749 300 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 BRAFP15056 766 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 KCNA4P22459 653 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 POLR2BP30876 1174 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 ARFIP2P53365 341 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 MYL7Q01449 175 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 ADCY1Q08828 1119 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 RARS2Q5T160 578 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 PODNQ7Z5L7 613 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 MMS19Q96T76 1030 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 C1orf112Q9NSG2 853 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 PPARGC1AQ9UBK2 798 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 FBXL5Q9UKA1 691 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 LAMC3Q9Y6N6 1575 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 DAPK3O43293 454 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 MAPK4P31152 587 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 PAPOLAP51003 745 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 PDE1BQ01064 536 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 AP1B1Q10567 949 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 ZNF790Q6PG37 636 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 ZNF589Q86UQ0 364 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 TBC1D22AQ8WUA7 517 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 PIK3R5Q8WYR1 880 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 IP6K1Q92551 441 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 ZBTB10Q96DT7 871 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 HIC2Q96JB3 615 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 FAM161BQ96MY7 647 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 ZFATQ9P243 1243 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 WDR19Q8NEZ3 1342 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 RFX7Q2KHR2 1363 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 PLEKHG2Q9H7P9 1386 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms