RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 FADS2P1A8MWK0 482 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 F6X3S4 739 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 HSP90AB1P08238 724 aaKnown RBP6.03□□□□□ -1.44
NUP54-206ENST00000508465 KCNC1P48547 511 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 KRTAP10-2P60368 255 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 SLC39A6Q13433 755 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 BBS9Q3SYG4 887 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 HSF5Q4G112 596 aaPredicted RBP6.03□□□□□ -1.44
NUP54-206ENST00000508465 SNAP47Q5SQN1 464 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 NBPF12Q5TAG4 269 aaPredicted RBP6.03□□□□□ -1.44
NUP54-206ENST00000508465 ZPBP2Q6X784 338 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 TMEM74Q96NL1 305 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 BDH2Q9BUT1 245 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 PARP2Q9UGN5 583 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 PCDHA5Q9Y5H7 936 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 NHSQ6T4R5 1651 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 PALLDQ8WX93 1383 aa6.03□□□□□ -1.44
NUP54-206ENST00000508465 SHANK3Q9BYB0 1731 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 PNPLA7Q6ZV29 1317 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 RREB1Q92766 1687 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 A0A1W2PQ45 241 aaPredicted RBP6.02□□□□□ -1.45
NUP54-206ENST00000508465 A0A1W2PQY0 241 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 NUDT19A8MXV4 375 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 RNMTO43148 476 aaKnown RBP6.02□□□□□ -1.45
NUP54-206ENST00000508465 SIGLEC6O43699 453 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 DNAJA2O60884 412 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 PRKCAP17252 672 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 PFKLP17858 780 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 PRKAR2BP31323 418 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 DAB2P98082 770 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 EFEMP1Q12805 493 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 ARSHQ5FYA8 562 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 REC114Q7Z4M0 266 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 GOLM1Q8NBJ4 401 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 IL17REQ8NFR9 667 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 RSRP1Q9BUV0 290 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 NUDCQ9Y266 331 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 GPR55Q9Y2T6 319 aaPredicted RBP6.02□□□□□ -1.45
NUP54-206ENST00000508465 DOT1LQ8TEK3 1739 aa6.02□□□□□ -1.45
NUP54-206ENST00000508465 KDM6AO15550 1401 aaPredicted RBP6.01□□□□□ -1.45
NUP54-206ENST00000508465 A0A1W2PQ27 194 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 A0A1W2PQ64 194 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 A0A1W2PQC6 194 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 A0A1W2PQD8 194 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 UBOX5O94941 541 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 PRAMEF1O95521 474 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 CAP1Q01518 475 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 DCTN1Q14203 1278 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 CBX2Q14781 532 aaPredicted RBP6.01□□□□□ -1.45
NUP54-206ENST00000508465 NR1I3Q14994 352 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 NUP43Q8NFH3 380 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 EAF1Q96JC9 268 aaPredicted RBP6.01□□□□□ -1.45
NUP54-206ENST00000508465 RHOVQ96L33 236 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 MTFR1LQ9H019 292 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 CHST7Q9NS84 486 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 ACSL6Q9UKU0 697 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 PALD1Q9ULE6 856 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 KDRP35968 1356 aa6.01□□□□□ -1.45
NUP54-206ENST00000508465 GOLGB1Q14789 3259 aaKnown RBP6□□□□□ -1.45
NUP54-206ENST00000508465 KCNQ3O43525 872 aa6□□□□□ -1.45
NUP54-206ENST00000508465 ZEB1P37275 1124 aaPredicted RBP6□□□□□ -1.45
NUP54-206ENST00000508465 NCKAP1LP55160 1127 aa6□□□□□ -1.45
NUP54-206ENST00000508465 SNW1Q13573 536 aaKnown RBP6□□□□□ -1.45
NUP54-206ENST00000508465 KIR3DS1Q14943 382 aa6□□□□□ -1.45
NUP54-206ENST00000508465 TARBP2Q15633 366 aaKnown RBP6□□□□□ -1.45
NUP54-206ENST00000508465 CWF19L2Q2TBE0 894 aaKnown RBP6□□□□□ -1.45
NUP54-206ENST00000508465 MCM10Q7L590 875 aa6□□□□□ -1.45
NUP54-206ENST00000508465 TP53I13Q8NBR0 393 aaPredicted RBP6□□□□□ -1.45
NUP54-206ENST00000508465 GPR20Q99678 358 aa6□□□□□ -1.45
NUP54-206ENST00000508465 CDADC1Q9BWV3 514 aa6□□□□□ -1.45
NUP54-206ENST00000508465 PRDM14Q9GZV8 571 aa6□□□□□ -1.45
NUP54-206ENST00000508465 SLC52A2Q9HAB3 445 aa6□□□□□ -1.45
NUP54-206ENST00000508465 MIS18AQ9NYP9 233 aa6□□□□□ -1.45
NUP54-206ENST00000508465 GMIPQ9P107 970 aa6□□□□□ -1.45
NUP54-206ENST00000508465 CNOT11Q9UKZ1 510 aaKnown RBP6□□□□□ -1.45
NUP54-206ENST00000508465 TOGARAM1Q9Y4F4 1720 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 ITGB4P16144 1822 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 COL3A1P02461 1466 aaPredicted RBP5.99□□□□□ -1.45
NUP54-206ENST00000508465 ANKRD33BA6NCL7 494 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 MINDY4BA8MYZ0 360 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 CLEC3AO75596 197 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 INSRRP14616 1297 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 FAM160A1Q05DH4 1040 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 RTP5Q14D33 572 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 ZFYVE27Q5T4F4 411 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 ZC3H14Q6PJT7 736 aaKnown RBP5.99□□□□□ -1.45
NUP54-206ENST00000508465 DNAJC10Q8IXB1 793 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 SYT17Q9BSW7 474 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 MYRFQ9Y2G1 1151 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 PKD1L3Q7Z443 1732 aa5.99□□□□□ -1.45
NUP54-206ENST00000508465 PATL2C9JE40 543 aaKnown RBP5.98□□□□□ -1.45
NUP54-206ENST00000508465 CTSHP09668 335 aa5.98□□□□□ -1.45
NUP54-206ENST00000508465 POLD1P28340 1107 aa5.98□□□□□ -1.45
NUP54-206ENST00000508465 CCNFP41002 786 aa5.98□□□□□ -1.45
NUP54-206ENST00000508465 CRKLP46109 303 aaKnown RBP5.98□□□□□ -1.45
NUP54-206ENST00000508465 MAPKAPK2P49137 400 aa5.98□□□□□ -1.45
NUP54-206ENST00000508465 SLURP1P55000 103 aa5.98□□□□□ -1.45
NUP54-206ENST00000508465 TEFQ10587 303 aa5.98□□□□□ -1.45
NUP54-206ENST00000508465 RALBP1Q15311 655 aa5.98□□□□□ -1.45
NUP54-206ENST00000508465 UBXN11Q5T124 520 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms