RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SLFN12Q8IYM2 578 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 NSUN6Q8TEA1 469 aaKnown RBP3.27□□□□□ -1.89
NEDD4-208ENST00000508342 NSMCE1Q8WV22 266 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 TCP11Q8WWU5 503 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 RIOK1Q9BRS2 568 aaKnown RBP3.27□□□□□ -1.89
NEDD4-208ENST00000508342 BCL2L12Q9HB09 334 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 TRPC7Q9HCX4 862 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 PLSCR2Q9NRY7 297 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 IRAK4Q9NWZ3 460 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 TPCN1Q9ULQ1 816 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 RWDD3Q9Y3V2 267 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 PTPRZ1P23471 2315 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-208ENST00000508342 FER1L6Q2WGJ9 1857 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-208ENST00000508342 RPS6KA5O75582 802 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 FDX1P10109 184 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 TNNT1P13805 278 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 KLRC2P26717 231 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 CYP2C19P33261 490 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 POU5F1BQ06416 359 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 DMP1Q13316 513 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-208ENST00000508342 NEDD9Q14511 834 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 CCDC40Q4G0X9 1142 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 GPATCH4Q5T3I0 446 aaKnown RBP3.27□□□□□ -1.89
NEDD4-208ENST00000508342 KANK3Q6NY19 840 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 CEP68Q76N32 757 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 RBM23Q86U06 439 aaKnown RBP3.27□□□□□ -1.89
NEDD4-208ENST00000508342 C8orf76Q96K31 380 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 JPH2Q9BR39 696 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-208ENST00000508342 AMNQ9BXJ7 453 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 RTFDC1Q9BY42 306 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-208ENST00000508342 LRRC2Q9BYS8 371 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 UNC93B1Q9H1C4 597 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 HIPK3Q9H422 1215 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 SYNDIG1Q9H7V2 258 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 EXOC7Q9UPT5 735 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 IKBKGQ9Y6K9 419 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 MAST2Q6P0Q8 1798 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 CYP2D7A0A087X1C5 515 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 DLL1O00548 723 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 SRGAP2CP0DJJ0 459 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 KRT85P78386 507 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 MTA1Q13330 715 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 SDE2Q6IQ49 451 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 PSRC1Q6PGN9 363 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-208ENST00000508342 KRBA2Q6ZNG9 492 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 OTOP1Q7RTM1 612 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 FILIP1Q7Z7B0 1213 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 CABP7Q86V35 215 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 SLC44A5Q8NCS7 719 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 PI4K2BQ8TCG2 481 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 TIFAQ96CG3 184 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 NLRP4Q96MN2 994 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 SPATC1LQ9H0A9 340 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 NKX2-4Q9H2Z4 354 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 INCENPQ9NQS7 918 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 ANKFY1Q9P2R3 1169 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 SBF1O95248 1867 aa3.27□□□□□ -1.89
NEDD4-208ENST00000508342 ASTN2O75129 1339 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-208ENST00000508342 SMCO2A6NFE2 343 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 SPDYE16A6NNV3 312 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ACRP10323 421 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ZNF18P17022 549 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 VCAM1P19320 739 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ERCC5P28715 1186 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 MTERF2Q49AM1 385 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 TDRD12Q587J7 1177 aaKnown RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 CC2D1AQ6P1N0 951 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 HS2ST1Q7LGA3 356 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 KIAA1524Q8TCG1 905 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 TBC1D5Q92609 795 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 POM121Q96HA1 1249 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 APOL5Q9BWW9 433 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 GCOM2Q9BZD3 368 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 CUEDC1Q9NWM3 386 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 IL20Q9NYY1 176 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PLXNB2O15031 1838 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 FSD2A1L4K1 749 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 TBKBP1A7MCY6 615 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 KIF3CO14782 793 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 FIBPO43427 364 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PRKAB2O43741 272 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PCP11498 1178 aaKnown RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 KCNA3P22001 575 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 INPP5BP32019 993 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 MARSP56192 900 aaKnown RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 RBM10P98175 930 aaKnown RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 TBC1D8BQ0IIM8 1120 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 LAMC2Q13753 1193 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 MFSD10Q14728 455 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PDXDC2PQ6P474 469 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 GLMNQ92990 594 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 CCDC114Q96M63 670 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 SLC4A9Q96Q91 983 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 LAMB1P07942 1786 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PNMA6EA0A0J9YXQ4 647 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 LRRIQ4A6NIV6 560 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 DNM1LO00429 736 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PRRG1O14668 218 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms