RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ATRIPQ8WXE1 791 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 RUNDC1Q96C34 613 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 VPS50Q96JG6 964 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 CENPKQ9BS16 269 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 KLHL4Q9C0H6 718 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 C12orf10Q9HB07 376 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 DISC1Q9NRI5 854 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 KRT82Q9NSB4 513 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 RRP7BPQ9NSQ0 103 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 MAP3K20Q9NYL2 800 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 BTBD7Q9P203 1132 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 GPC6Q9Y625 555 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 AFF2P51816 1311 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 LINC00854A0A1B0GVQ3 168 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 FAM47E-STBD1D6RA91 191 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 E7EVH7 732 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 CETN3O15182 167 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 PABPC4LP0CB38 370 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 KRT4P19013 534 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 RXRAP19793 462 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 TNNI2P48788 182 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 MXI1P50539 228 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 RASSF7Q02833 373 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 CYLC2Q14093 348 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 ANKDD1AQ495B1 522 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 TCERG1LQ5VWI1 586 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 Q6ZNX1 250 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 ARHGAP27Q6ZUM4 889 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 RHOT2Q8IXI1 618 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 TMCO5AQ8N6Q1 288 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 STARD8Q92502 1023 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 CDKL2Q92772 493 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 GATA6Q92908 595 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 KHSRPQ92945 711 aaKnown RBP eCLIP11.76□□□□□ -0.531e-6■■■■□ 20.4
PDLIM5-210ENST00000508216 ANKRD36BP1Q96IX9 119 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 GPR101Q96P66 508 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 TAF1DQ9H5J8 278 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 IGSF5Q9NSI5 407 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 HYPKQ9NX55 129 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 ADAM22Q9P0K1 906 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 PCDHGB3Q9Y5G1 929 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 GAKO14976 1311 aa11.76□□□□□ -0.53
PDLIM5-210ENST00000508216 ERCC6L2Q5T890 1561 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 SMIM31A0A1B0GVY4 71 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 VPS37CA5D8V6 355 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 ERVV-2B6SEH9 535 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 SEMA3EO15041 775 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 ZBTB7BO15156 539 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 GNAI2P04899 355 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 TKTP29401 623 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 SKIV2L2P42285 1042 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 B2MP61769 119 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 TMF1P82094 1093 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 ITGB3BPQ13352 177 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 IRF5Q13568 498 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 WDR45BQ5MNZ6 344 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 KCTD16Q68DU8 428 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 PNMA8AQ86V59 439 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 SPICE1Q8N0Z3 855 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 UQCC2Q9BRT2 126 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 FHDC1Q9C0D6 1143 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 RNPEPL1Q9HAU8 725 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 GPR108Q9NPR9 543 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 CFDP1Q9UEE9 299 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 SLC12A6Q9UHW9 1150 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 ASAP1Q9ULH1 1129 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 HEY1Q9Y5J3 304 aa11.75□□□□□ -0.53
PDLIM5-210ENST00000508216 FOXD2O60548 495 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 SNX2O60749 519 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 B3GALNT1O75752 331 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 DGKIO75912 1065 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 TJP3O95049 919 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 GLI1P08151 1106 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 NUDT7P0C024 238 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 FECHP22830 423 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 PTGER2P43116 358 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 SERPINB4P48594 390 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 OCRLQ01968 901 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 IKQ13123 557 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 SIGIRRQ6IA17 410 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 UNC13DQ70J99 1090 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ZNF572Q7Z3I7 529 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 VPS36Q86VN1 386 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 SPARTQ8N0X7 666 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 NDUFAF2Q8N183 169 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ANKS4BQ8N8V4 417 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ARL8AQ96BM9 186 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 MAELQ96JY0 434 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 IFT74Q96LB3 600 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 MUC3BQ9H195 1237 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ZSWIM4Q9H7M6 989 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 TRPC7Q9HCX4 862 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 PIH1D3Q9NQM4 214 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ARHGEF3Q9NR81 526 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 AASDHPPTQ9NRN7 309 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 XPO7Q9UIA9 1087 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 SCINQ9Y6U3 715 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ITIH6Q6UXX5 1313 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms