RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 GPR152Q8TDT2 470 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 MYO19Q96H55 970 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 ERICH3Q5RHP9 1530 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 K7ESF4 209 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 DOK2O60496 412 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 VEGFAP15692 232 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 SKIV2L2P42285 1042 aaKnown RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 PRIM2P49643 509 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 SMAD4Q13485 552 aaKnown RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 RABEP1Q15276 862 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 SKOR2Q2VWA4 1001 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 TBCELQ5QJ74 424 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 PPP1R42Q7Z4L9 355 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 ANKRD24Q8TF21 1146 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 RTF1Q92541 710 aaKnown RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 HPS3Q969F9 1004 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 ZSCAN31Q96LW9 406 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 ACO2Q99798 780 aaKnown RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 WASH6PQ9NQA3 447 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 DKK3Q9UBP4 350 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 TBC1D29Q9UFV1 150 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 TNPO3Q9Y5L0 923 aaKnown RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 A0A1W2PPH5 198 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 PGPEP1LA6NFU8 196 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 C11orf95C9JLR9 678 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 PAK3O75914 559 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 KRT38O76015 456 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 PAPLNO95428 1278 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 STAU1O95793 577 aaKnown RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 MYCLP12524 364 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 PREPLQ4J6C6 727 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 PKDCCQ504Y2 493 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 PTRH1Q86Y79 214 aaKnown RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 CCDC170Q8IYT3 715 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 ZSCAN18Q8TBC5 510 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 PIGSQ96S52 555 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 MRPL4Q9BYD3 311 aaKnown RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 IQCGQ9H095 443 aaKnown RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 AIPL1Q9NZN9 384 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 SLC30A1Q9Y6M5 507 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 ZFP37Q9Y6Q3 630 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 PRXQ9BXM0 1461 aa8.38□□□□□ -1.07
PDGFRA-206ENST00000508170 H0Y626 953 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 ZEB2O60315 1214 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 AOC2O75106 756 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 SOCS5O75159 536 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 STARD3NLO95772 234 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 CAPNS1P04632 268 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 CKMT1AP12532 417 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 ATP5F1P24539 256 aaPredicted RBP8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 FAPQ12884 760 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 SEMA5AQ13591 1074 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 BLMHQ13867 455 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 TAF5Q15542 800 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 SMAD1Q15797 465 aaKnown RBP8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 RPUSD3Q6P087 351 aaKnown RBP8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 LRRC69Q6ZNQ3 347 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 GALNT7Q86SF2 657 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 TATDN2Q93075 761 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 COG8Q96MW5 612 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 TRIM39Q9HCM9 518 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 MARK1Q9P0L2 795 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 ZSWIM5Q9P217 1185 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 PCDHB11Q9Y5F2 797 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 PCDHGC5Q9Y5F6 944 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 A0A087X0M5 115 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 A0A1B0GX30 115 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 A0A1W2PQH9 124 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 CAPN9O14815 690 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 GRIN3BO60391 1043 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 CLTBP09497 229 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 TSPY4P0CV99 314 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 TSPY10P0CW01 314 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 PCSK2P16519 638 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 HDCP19113 662 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 C21orf58P58505 322 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 C1QBPQ07021 282 aaKnown RBP8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 ZBTB17Q13105 803 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 DGKKQ5KSL6 1271 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 NUP93Q8N1F7 819 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 THEMISQ8N1K5 641 aaPredicted RBP8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 LRRC43Q8N309 656 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 PPM1NQ8N819 430 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 C1orf162Q8NEQ5 155 aaPredicted RBP8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 CDC6Q99741 560 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 RNF38Q9H0F5 515 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 C2orf40Q9H1Z8 148 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 CERS4Q9HA82 394 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 MCM9Q9NXL9 1143 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 DENND2AQ9ULE3 1009 aa8.37□□□□□ -1.07
PDGFRA-206ENST00000508170 PSDA5PKW4 1024 aaPredicted RBP8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 NBPF26B4DH59 902 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 PI4K2BG5E9Z4 385 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 ZBTB14O43829 449 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 PAHP00439 452 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 FERP16591 822 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 CD9P21926 228 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 FGFR4P22455 802 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 GUCY2CP25092 1073 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms