RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ALDH1A1P00352 501 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 MYL1P05976 194 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 GSTO1P78417 241 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 MTA1Q13330 715 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 MPP2Q14168 576 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 IL31Q6EBC2 164 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 ANKRD23Q86SG2 305 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 RTKN2Q8IZC4 609 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 ST13P5Q8NFI4 369 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-206ENST00000507875 ASAP3Q8TDY4 903 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 HCN2Q9UL51 889 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 CORINQ9Y5Q5 1042 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 TIAM2Q8IVF5 1701 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 ECM29Q5VYK3 1845 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 UFL1O94874 794 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 LDHCP07864 332 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 SCARF1Q14162 830 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 ZNF460Q14592 562 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 ALX1Q15699 326 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 TPH2Q8IWU9 490 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 NSUN5Q96P11 429 aaKnown RBP8.18□□□□□ -1.1
CLCN3-206ENST00000507875 CDH19Q9H159 772 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 A0A0D9SFI3 127 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 HMGB1P1B2RPK0 211 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 SELPP16109 830 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 ZKSCAN1P17029 563 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 BMP6P22004 513 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 PSMA5P28066 241 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 ID4P47928 161 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 NECTIN1Q15223 517 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 PCBP1Q15365 356 aaKnown RBP eCLIP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 SKOR2Q2VWA4 1001 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 DPP8Q6V1X1 898 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 BORCS6Q96GS4 357 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 ALDH8A1Q9H2A2 487 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 BRD7Q9NPI1 651 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 RNF181Q9P0P0 153 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 NSFL1CQ9UNZ2 370 aaKnown RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 CDK5RAP2Q96SN8 1893 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 TCRBV5S4A2TA0A5A2 114 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 IFRD1O00458 451 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 PDE6AP16499 860 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 COPB2P35606 906 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 CTSOP43234 321 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 GYG1P46976 350 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 NEK3P51956 506 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 PIN1Q13526 163 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 RAB3GAP1Q15042 981 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 GNASQ5JWF2 1037 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 LIAT1Q6ZQX7 453 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 RAB44Q7Z6P3 723 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 ZC3H12CQ9C0D7 883 aaKnown RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 PIH1D3Q9NQM4 214 aaKnown RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 AVENQ9NQS1 362 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-206ENST00000507875 AASDHPPTQ9NRN7 309 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 DAAM1Q9Y4D1 1078 aa8.17□□□□□ -1.1
CLCN3-206ENST00000507875 MAST3O60307 1309 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 DICER1Q9UPY3 1922 aaKnown RBP8.16□□□□□ -1.1
CLCN3-206ENST00000507875 SOX5P35711 763 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 SEPT7Q16181 437 aaKnown RBP8.16□□□□□ -1.1
CLCN3-206ENST00000507875 LONRF1Q17RB8 773 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 CCDC93Q567U6 631 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 SLC9C2Q5TAH2 1124 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 NYAP1Q6ZVC0 841 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 NCAPG2Q86XI2 1143 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 FAM227BQ96M60 508 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 GPAMQ9HCL2 828 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 CD209Q9NNX6 404 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 LRP2BPQ9P2M1 347 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 COL1A1P02452 1464 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-206ENST00000507875 NAV1Q8NEY1 1877 aa8.16□□□□□ -1.1
CLCN3-206ENST00000507875 GABRDO14764 452 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 KHNYNO15037 678 aaKnown RBP8.15□□□□□ -1.1
CLCN3-206ENST00000507875 GRIA2P42262 883 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 HSP90AA2PQ14568 343 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-206ENST00000507875 TNPO1Q92973 898 aaKnown RBP8.15□□□□□ -1.1
CLCN3-206ENST00000507875 EDC3Q96F86 508 aaKnown RBP8.15□□□□□ -1.1
CLCN3-206ENST00000507875 PAGR1Q9BTK6 254 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 MRIQ9BWK5 157 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 RBM8AQ9Y5S9 174 aaKnown RBP8.15□□□□□ -1.1
CLCN3-206ENST00000507875 VSTM5A8MXK1 200 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 NFKBIEO00221 500 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 IDH1O75874 414 aaKnown RBP8.15□□□□□ -1.1
CLCN3-206ENST00000507875 ZRANB2O95218 330 aaKnown RBP eCLIP8.15□□□□□ -1.11e-6■■■■■ 42
CLCN3-206ENST00000507875 FOSP01100 380 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-206ENST00000507875 PGRP06401 933 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 FAM163BP0C2L3 166 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 TGFB3P10600 412 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 RHOQP17081 205 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 PMLP29590 882 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 MLC1Q15049 377 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 PKN3Q6P5Z2 889 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 VHLLQ6RSH7 139 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 KISS1RQ969F8 398 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-206ENST00000507875 CHMP4CQ96CF2 233 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 FAM163AQ96GL9 167 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-206ENST00000507875 RHOBTB2Q9BYZ6 727 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 MUC3BQ9H195 1237 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 TMX1Q9H3N1 280 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 ZDHHC3Q9NYG2 299 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms