RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CALML4Q96GE6 196 aa19.65■□□□□ 0.74
RNF4-209ENST00000507784 CDK5RAP3Q96JB5 506 aa19.65■□□□□ 0.74
RNF4-209ENST00000507784 MAML3Q96JK9 1138 aa19.65■□□□□ 0.74
RNF4-209ENST00000507784 CCSER1Q9C0I3 900 aa19.65■□□□□ 0.74
RNF4-209ENST00000507784 TBC1D22BQ9NU19 505 aa19.65■□□□□ 0.74
RNF4-209ENST00000507784 VAV3Q9UKW4 847 aa19.65■□□□□ 0.74
RNF4-209ENST00000507784 ICAM3P32942 547 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 CCT6AP40227 531 aaKnown RBP19.64■□□□□ 0.73
RNF4-209ENST00000507784 ITGB3BPQ13352 177 aaPredicted RBP19.64■□□□□ 0.73
RNF4-209ENST00000507784 CAMK4Q16566 473 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 CCDC183Q5T5S1 534 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 RRAGBQ5VZM2 374 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 OTOP1Q7RTM1 612 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 FBXO16Q8IX29 292 aaPredicted RBP19.64■□□□□ 0.73
RNF4-209ENST00000507784 SOCS4Q8WXH5 440 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 CFHR5Q9BXR6 569 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 NUP62CLQ9H1M0 184 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 UNC45AQ9H3U1 944 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.64■□□□□ 0.73
RNF4-209ENST00000507784 TMEM63CQ9P1W3 806 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 SERTAD1Q9UHV2 236 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 THSD7BQ9C0I4 1608 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 DOCK5Q9H7D0 1870 aa19.64■□□□□ 0.73
RNF4-209ENST00000507784 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.63■□□□□ 0.73
RNF4-209ENST00000507784 MIER3Q7Z3K6 550 aa19.63■□□□□ 0.73
RNF4-209ENST00000507784 CNNM3Q8NE01 707 aa19.63■□□□□ 0.73
RNF4-209ENST00000507784 TRIM47Q96LD4 638 aa19.63■□□□□ 0.73
RNF4-209ENST00000507784 TINF2Q9BSI4 451 aa19.63■□□□□ 0.73
RNF4-209ENST00000507784 BEGAINQ9BUH8 593 aa19.63■□□□□ 0.73
RNF4-209ENST00000507784 CLSTN2Q9H4D0 955 aa19.63■□□□□ 0.73
RNF4-209ENST00000507784 GJD2Q9UKL4 321 aa19.63■□□□□ 0.73
RNF4-209ENST00000507784 SAMM50Q9Y512 469 aa19.63■□□□□ 0.73
RNF4-209ENST00000507784 STK24Q9Y6E0 443 aa19.63■□□□□ 0.73
RNF4-209ENST00000507784 A0A087X0B3 334 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 GPR25O00155 361 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 EML1O00423 815 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 DHX15O43143 795 aaKnown RBP19.62■□□□□ 0.73
RNF4-209ENST00000507784 KCNA2P16389 499 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 STAT6P42226 847 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 SPIRE1Q08AE8 756 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 PPP2R5CQ13362 524 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 LONRF3Q496Y0 759 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 KCNV1Q6PIU1 500 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 CEP57L1Q8IYX8 460 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 IQUBQ8NA54 791 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 CD99L2Q8TCZ2 262 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 USP6NLQ92738 828 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 PYM1Q9BRP8 204 aaKnown RBP19.62■□□□□ 0.73
RNF4-209ENST00000507784 MMTAG2Q9BU76 263 aaKnown RBP19.62■□□□□ 0.73
RNF4-209ENST00000507784 TNMDQ9H2S6 317 aa19.62■□□□□ 0.73
RNF4-209ENST00000507784 SP4Q02446 784 aa19.61■□□□□ 0.73
RNF4-209ENST00000507784 EPHA7Q15375 998 aa19.61■□□□□ 0.73
RNF4-209ENST00000507784 HAUS3Q68CZ6 603 aa19.61■□□□□ 0.73
RNF4-209ENST00000507784 MAMDC4Q6UXC1 1216 aa19.61■□□□□ 0.73
RNF4-209ENST00000507784 KRBA2Q6ZNG9 492 aa19.61■□□□□ 0.73
RNF4-209ENST00000507784 TIGD1Q96MW7 591 aa19.61■□□□□ 0.73
RNF4-209ENST00000507784 APBA2Q99767 749 aa19.61■□□□□ 0.73
RNF4-209ENST00000507784 EIF2AK1Q9BQI3 630 aaKnown RBP19.61■□□□□ 0.73
RNF4-209ENST00000507784 VTA1Q9NP79 307 aa19.61■□□□□ 0.73
RNF4-209ENST00000507784 PDGFCQ9NRA1 345 aa19.61■□□□□ 0.73
RNF4-209ENST00000507784 DISC1Q9NRI5 854 aa19.61■□□□□ 0.73
RNF4-209ENST00000507784 GABRQQ9UN88 632 aa19.61■□□□□ 0.73
RNF4-209ENST00000507784 NFASCO94856 1347 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 KDM3AQ9Y4C1 1321 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 SNAI1O95863 264 aaPredicted RBP19.6■□□□□ 0.73
RNF4-209ENST00000507784 HOXC6P09630 235 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 PLCG1P19174 1290 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 KRT76Q01546 638 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 SP2Q02086 613 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 MAP2K1Q02750 393 aaPredicted RBP19.6■□□□□ 0.73
RNF4-209ENST00000507784 GRB10Q13322 594 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 NEDD9Q14511 834 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 CCL14Q16627 93 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 LY6KQ17RY6 165 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 CYFIP1Q7L576 1253 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 MSL3Q8N5Y2 521 aaKnown RBP19.6■□□□□ 0.73
RNF4-209ENST00000507784 GIMAP8Q8ND71 665 aaPredicted RBP19.6■□□□□ 0.73
RNF4-209ENST00000507784 DYDC2Q96IM9 177 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 PNMA5Q96PV4 448 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 BCAS3Q9H6U6 928 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 SAGE1Q9NXZ1 904 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 FLRT1Q9NZU1 646 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 SLC9A2Q9UBY0 812 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 USP25Q9UHP3 1055 aa19.6■□□□□ 0.73
RNF4-209ENST00000507784 ZHX1Q9UKY1 873 aaPredicted RBP19.6■□□□□ 0.73
RNF4-209ENST00000507784 SYNGAP1Q96PV0 1343 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 FKTNO75072 461 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 MED24O75448 989 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 TXNP10599 105 aaKnown RBP19.59■□□□□ 0.73
RNF4-209ENST00000507784 TGFB3P10600 412 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 HOXD10P28358 340 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 CYP4A11Q02928 519 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 TTLL4Q14679 1199 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 ERO1AQ96HE7 468 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 CCDC34Q96HJ3 373 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 ANP32EQ9BTT0 268 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 MLXIPQ9HAP2 919 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 JPH1Q9HDC5 661 aaPredicted RBP19.59■□□□□ 0.73
RNF4-209ENST00000507784 TSKSQ9UJT2 592 aa19.59■□□□□ 0.73
RNF4-209ENST00000507784 DDX41Q9UJV9 622 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms