RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ADRB1P08588 477 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 ZNF286BP0CG31 522 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 NPR3P17342 541 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 RFX1P22670 979 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 SLC1A4P43007 532 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 HIC1Q14526 733 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 ALDH1L2Q3SY69 923 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 CWF19L1Q69YN2 538 aaKnown RBP8.57□□□□□ -1.04
VCAN-207ENST00000507162 ANKRD54Q6NXT1 300 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 LLGL2Q6P1M3 1020 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 KCTD1Q719H9 257 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 VN1R2Q8NFZ6 395 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 ATP8B4Q8TF62 1192 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 ATP6V0A1Q93050 837 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 P2RX5Q93086 422 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 MKL1Q969V6 931 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 DNAJC2Q99543 621 aaKnown RBP8.57□□□□□ -1.04
VCAN-207ENST00000507162 KATNAL1Q9BW62 490 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 BCL11AQ9H165 835 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 NCDNQ9UBB6 729 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 CDH22Q9UJ99 828 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 FBXL21Q9UKT6 434 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 MTMR7Q9Y216 660 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 CNOT1A5YKK6 2376 aaKnown RBP8.57□□□□□ -1.04
VCAN-207ENST00000507162 NLRC5Q86WI3 1866 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 NAV1Q8NEY1 1877 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 CEP295Q9C0D2 2601 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 MYH8P13535 1937 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 LOC102724159A0A0B4J2E5 919 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 TCRBV5S4A2TA0A5A2 114 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 B4DLN1 442 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 GOLIM4O00461 696 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 NFIBO00712 420 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 TTLL1O95922 423 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 SRGAP2BP0DMP2 458 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 MRPL12P52815 198 aaKnown RBP8.56□□□□□ -1.04
VCAN-207ENST00000507162 ARHGAP1Q07960 439 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 PWP2Q15269 919 aaKnown RBP8.56□□□□□ -1.04
VCAN-207ENST00000507162 PAN2Q504Q3 1202 aaKnown RBP8.56□□□□□ -1.04
VCAN-207ENST00000507162 NAALADL2Q58DX5 795 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 SYCE2Q6PIF2 218 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 ZC3H14Q6PJT7 736 aaKnown RBP8.56□□□□□ -1.04
VCAN-207ENST00000507162 MAMSTRQ6ZN01 415 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 RNF207Q6ZRF8 634 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 SERINC5Q86VE9 423 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 GMCL1P1Q8NEA9 526 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 APBB2Q92870 758 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 CEP95Q96GE4 821 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 MTMR4Q9NYA4 1195 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 PRR12Q9ULL5 1215 aa8.56□□□□□ -1.04
VCAN-207ENST00000507162 MRPL42Q9Y6G3 142 aaKnown RBP8.56□□□□□ -1.04
VCAN-207ENST00000507162 C17orf102A2RUQ5 167 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 PRR5-ARHGAP8B1AHC4 643 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 ENPP3O14638 875 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 SORBS3O60504 671 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 PRDM1O75626 825 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 IBSPP21815 317 aaPredicted RBP8.55□□□□□ -1.04
VCAN-207ENST00000507162 ARHGAP8P85298 464 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 DUSP6Q16828 381 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 SPECC1Q5M775 1068 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 VARS2Q5ST30 1063 aaKnown RBP8.55□□□□□ -1.04
VCAN-207ENST00000507162 CCDC62Q6P9F0 684 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 SLC30A10Q6XR72 485 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 SIX5Q8N196 739 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 ZNF689Q96CS4 500 aaPredicted RBP8.55□□□□□ -1.04
VCAN-207ENST00000507162 RTKNQ9BST9 563 aa8.55□□□□□ -1.04
VCAN-207ENST00000507162 ATG2AQ2TAZ0 1938 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 IGKV6D-41A0A0C4DH26 115 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 HAS3O00219 553 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 TREHO43280 583 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 DGKIO75912 1065 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 ICAM1P05362 532 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 WEE2P0C1S8 567 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 SP9P0CG40 484 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 SLC16A2P36021 539 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 RPS6P62753 249 aaKnown RBP8.54□□□□□ -1.04
VCAN-207ENST00000507162 PPM1JQ5JR12 505 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 SPOUT1Q5T280 376 aaKnown RBP8.54□□□□□ -1.04
VCAN-207ENST00000507162 RCSD1Q6JBY9 416 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 CES5AQ6NT32 575 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 AACSQ86V21 672 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 CDCA3Q99618 268 aaPredicted RBP8.54□□□□□ -1.04
VCAN-207ENST00000507162 POMKQ9H5K3 350 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 MRS2Q9HD23 443 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 ERVK-5Q9HDB9 667 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 METRNQ9UJH8 293 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 USP18Q9UMW8 372 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 CACNA1IQ9P0X4 2223 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 BAZ2AQ9UIF9 1905 aaKnown RBP8.54□□□□□ -1.04
VCAN-207ENST00000507162 ZZEF1O43149 2961 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 FRYQ5TBA9 3013 aa8.54□□□□□ -1.04
VCAN-207ENST00000507162 KINO60870 393 aaKnown RBP8.53□□□□□ -1.04
VCAN-207ENST00000507162 GHRP10912 638 aa8.53□□□□□ -1.04
VCAN-207ENST00000507162 EDNRBP24530 442 aa8.53□□□□□ -1.04
VCAN-207ENST00000507162 ERVFC1P60507 584 aa8.53□□□□□ -1.04
VCAN-207ENST00000507162 CRIPAKQ8N1N5 446 aa8.53□□□□□ -1.04
VCAN-207ENST00000507162 GPR161Q8N6U8 529 aaKnown RBP8.53□□□□□ -1.04
VCAN-207ENST00000507162 TDRD5Q8NAT2 981 aaKnown RBP8.53□□□□□ -1.04
VCAN-207ENST00000507162 SUMF1Q8NBK3 374 aa8.53□□□□□ -1.04
VCAN-207ENST00000507162 DNERQ8NFT8 737 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms