RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 SYT1P21579 422 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 PTGS1P23219 599 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 ACLYP53396 1101 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 FOSBP53539 338 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 ITGB3BPQ13352 177 aaPredicted RBP11.04□□□□□ -0.64
SFXN1-205ENST00000506963 BECN1Q14457 450 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 SNX17Q15036 470 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 KCNA10Q16322 511 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 HSDL1Q3SXM5 330 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 PRR16Q569H4 304 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 C1orf53Q5VUE5 145 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 NECAB2Q7Z6G3 386 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 AFG1LQ8WV93 481 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 SLC5A5Q92911 643 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 RIT2Q99578 217 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 SEZ6LQ9BYH1 1024 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 MLXIPQ9HAP2 919 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 KCNMB3Q9NPA1 279 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 TBC1D22BQ9NU19 505 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 ELP1O95163 1332 aa11.04□□□□□ -0.64
SFXN1-205ENST00000506963 IPO5O00410 1097 aaKnown RBP11.03□□□□□ -0.64
SFXN1-205ENST00000506963 MSH4O15457 936 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 ASGR1P07306 291 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 HOXD11P31277 338 aaPredicted RBP11.03□□□□□ -0.64
SFXN1-205ENST00000506963 IRX5P78411 483 aaPredicted RBP11.03□□□□□ -0.64
SFXN1-205ENST00000506963 PURAQ00577 322 aaKnown RBP11.03□□□□□ -0.64
SFXN1-205ENST00000506963 BEX3Q00994 111 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 LETM2Q2VYF4 491 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 B3GNT9Q6UX72 402 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 CYFIP1Q7L576 1253 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 ETNPPLQ8TBG4 499 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 DIS3LQ8TF46 1054 aaKnown RBP11.03□□□□□ -0.64
SFXN1-205ENST00000506963 PAWRQ96IZ0 340 aaKnown RBP11.03□□□□□ -0.64
SFXN1-205ENST00000506963 FAM20AQ96MK3 541 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 SPATA33Q96N06 139 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 GPR20Q99678 358 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 ZNF577Q9BSK1 485 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 C11orf49Q9H6J7 331 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 BCAS3Q9H6U6 928 aa11.03□□□□□ -0.64
SFXN1-205ENST00000506963 JPH1Q9HDC5 661 aaPredicted RBP11.03□□□□□ -0.64
SFXN1-205ENST00000506963 DDX25Q9UHL0 483 aaKnown RBP11.03□□□□□ -0.64
SFXN1-205ENST00000506963 A0A1W2PQ45 241 aaPredicted RBP11.02□□□□□ -0.65
SFXN1-205ENST00000506963 A0A1W2PQY0 241 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 SLC37A4O43826 429 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 PSMD10O75832 226 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 ATG7O95352 703 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 F2P00734 622 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 HSP90AA1P07900 732 aaKnown RBP11.02□□□□□ -0.65
SFXN1-205ENST00000506963 KRT76Q01546 638 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 DGKDQ16760 1214 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 RILPL1Q5EBL4 403 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 ZNF746Q6NUN9 644 aaPredicted RBP11.02□□□□□ -0.65
SFXN1-205ENST00000506963 BRAPQ7Z569 592 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 SLC43A3Q8NBI5 491 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 GLT1D1Q96MS3 346 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 SLC9A2Q9UBY0 812 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 NOL7Q9UMY1 257 aaKnown RBP11.02□□□□□ -0.65
SFXN1-205ENST00000506963 MTMR6Q9Y217 621 aa11.02□□□□□ -0.65
SFXN1-205ENST00000506963 PDE4DIPQ5VU43 2346 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 IGKV6D-21A0A0A0MT36 114 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 GSTTP1A0A1W2PQM5 241 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 HAS3O00219 553 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 NOP56O00567 594 aaKnown RBP11.01□□□□□ -0.65
SFXN1-205ENST00000506963 WNT7AO00755 349 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 STX6O43752 255 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 CCNT1O60563 726 aaKnown RBP11.01□□□□□ -0.65
SFXN1-205ENST00000506963 LGR5O75473 907 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 TOB1P50616 345 aaPredicted RBP11.01□□□□□ -0.65
SFXN1-205ENST00000506963 GNL2Q13823 731 aaKnown RBP11.01□□□□□ -0.65
SFXN1-205ENST00000506963 CXCL17Q6UXB2 119 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 SMAP1Q8IYB5 467 aaPredicted RBP11.01□□□□□ -0.65
SFXN1-205ENST00000506963 SLFN12Q8IYM2 578 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 RDM1Q8NG50 284 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 SEPT1Q8WYJ6 367 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 KAT2BQ92831 832 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 HAS1Q92839 578 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 MTMR9Q96QG7 549 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 C16orf70Q9BSU1 422 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 MTG1Q9BT17 334 aaPredicted RBP11.01□□□□□ -0.65
SFXN1-205ENST00000506963 EMSYQ7Z589 1322 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 WDR81Q562E7 1941 aa11.01□□□□□ -0.65
SFXN1-205ENST00000506963 ALPK3Q96L96 1907 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 BRCA2P51587 3418 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 LAD1O00515 517 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 CCNE2O96020 404 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 LGALS2P05162 132 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 SFNP31947 248 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 CDK7P50613 346 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 ACTR2P61160 394 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 PTPN11Q06124 597 aaPredicted RBP11□□□□□ -0.65
SFXN1-205ENST00000506963 RESTQ13127 1097 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 TTC38Q5R3I4 469 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 LRCH2Q5VUJ6 765 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 MCTP1Q6DN14 999 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 ABHD15Q6UXT9 468 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 SLC39A5Q6ZMH5 540 aa11□□□□□ -0.65
SFXN1-205ENST00000506963 SESTD1Q86VW0 696 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms