RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 NCAPHQ15003 741 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 PRKD1Q15139 912 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 INF2Q27J81 1249 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 ZKSCAN2Q63HK3 967 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 IQCEQ6IPM2 695 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 TRIM59Q8IWR1 403 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 DPF3Q92784 378 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 ANAPC16Q96DE5 110 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 TRMT2BQ96GJ1 504 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 ACBD3Q9H3P7 528 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 CCSER2Q9H7U1 834 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 TIMM13Q9Y5L4 95 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 CYP1A1P04798 512 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 NKX3-2P78367 333 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 DGCR2P98153 550 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 CHRNA2Q15822 529 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 CEP68Q76N32 757 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 MRGPRGQ86SM5 289 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 RIOX2Q8IUF8 465 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 ZNF513Q8N8E2 541 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 DIO2Q92813 273 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 TMEM169Q96HH4 297 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 CHAMP1Q96JM3 812 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 ZSWIM3Q96MP5 696 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 NKX2-4Q9H2Z4 354 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 L2HGDHQ9H9P8 463 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 CYP26B1Q9NR63 512 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 LRP2BPQ9P2M1 347 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 STRIP2Q9ULQ0 834 aa4.28□□□□□ -1.72
TOPBP1-205ENST00000506779 MEFVO15553 781 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 SNRPB2P08579 225 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 BCL6P41182 706 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 ECI1P42126 302 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 GTF2A2P52657 109 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 PPP2CBP62714 309 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 PPP2CAP67775 309 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 KCNAB2Q13303 367 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 USP39Q53GS9 565 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 E4F1Q66K89 784 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 FAM169BQ8N8A8 192 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 NPLOC4Q8TAT6 608 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 NTN5Q8WTR8 489 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 FRS2Q8WU20 508 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 BTN2A2Q8WVV5 523 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 SEC16BQ96JE7 1060 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 CLIC6Q96NY7 704 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 PTPN18Q99952 460 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 BRIP1Q9BX63 1249 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 LGR4Q9BXB1 951 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 JADE2Q9NQC1 790 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 ZNF652Q9Y2D9 606 aa4.27□□□□□ -1.73
TOPBP1-205ENST00000506779 C9orf118A6NHY6 69 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 KCNJ6P48051 423 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 SV2CQ496J9 727 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 EPHA10Q5JZY3 1008 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 LARP1BQ659C4 914 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 TOE1Q96GM8 510 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 MRGPRX3Q96LB0 322 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 C8orf37Q96NL8 207 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 TMEM168Q9H0V1 697 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 DTLQ9NZJ0 730 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 CROTQ9UKG9 612 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 INPP5FQ9Y2H2 1132 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 PCDHB4Q9Y5E5 795 aa4.26□□□□□ -1.73
TOPBP1-205ENST00000506779 PROB1E7EW31 1015 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 CYP7B1O75881 506 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 FGRP09769 529 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 ZNF28P17035 718 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 ADAM9Q13443 819 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 CR1LQ2VPA4 569 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 HS1BP3Q53T59 392 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 PRR31Q5SQ13 230 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 PAPD7Q5XG87 772 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 STEAP3Q658P3 488 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 SLFN13Q68D06 897 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 NLRP10Q86W26 655 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 PPIL6Q8IXY8 311 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 Q8N1Y9 231 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 WRNIP1Q96S55 665 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 FTSJ1Q9UET6 329 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 X6R8D5 127 aa4.25□□□□□ -1.73
TOPBP1-205ENST00000506779 HGSO14964 777 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 PLSCR1O15162 318 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 TBX1O43435 398 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 ITGAVP06756 1048 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 BMP5P22003 454 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 HOXC12P31275 282 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 ZNF362Q5T0B9 420 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 C6orf15Q6UXA7 325 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 ARHGEF18Q6ZSZ5 1173 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 ZNF227Q86WZ6 799 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 CCDC103Q8IW40 242 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 LARP4BQ92615 738 aaKnown RBP4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 EXTL1Q92935 676 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 TMEM209Q96SK2 561 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 CLDND1Q9NY35 253 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 ACTR10Q9NZ32 417 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 TMEFF2Q9UIK5 374 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms