RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 MTMR9Q96QG7 549 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 SDF4Q9BRK5 362 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 AGO4Q9HCK5 861 aaKnown RBP11.6□□□□□ -0.55
RFC1-210ENST00000505077 ZHX1Q9UKY1 873 aaPredicted RBP11.6□□□□□ -0.55
RFC1-210ENST00000505077 PTCH2Q9Y6C5 1203 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 WNT7AO00755 349 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 SPTLC2O15270 562 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 MARCH6O60337 910 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 MSCO60682 206 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 GAS7O60861 476 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 ZNF865P0CJ78 1059 aaPredicted RBP11.59□□□□□ -0.55
RFC1-210ENST00000505077 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
RFC1-210ENST00000505077 AKR1A1P14550 325 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 KCNA2P16389 499 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 NCLP19338 710 aaKnown RBP11.59□□□□□ -0.55
RFC1-210ENST00000505077 UBA1P22314 1058 aaKnown RBP11.59□□□□□ -0.55
RFC1-210ENST00000505077 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
RFC1-210ENST00000505077 KRT76Q01546 638 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 SLC9C1Q4G0N8 1177 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 DUSP28Q4G0W2 176 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 LRCH2Q5VUJ6 765 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 CCDC62Q6P9F0 684 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 FBXO46Q6PJ61 603 aaPredicted RBP11.59□□□□□ -0.55
RFC1-210ENST00000505077 C4orf32Q8N8J7 132 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 LINC00301Q8NCQ3 95 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 SPATA32Q96LK8 384 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 AK8Q96MA6 479 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 JPH1Q9HDC5 661 aaPredicted RBP11.59□□□□□ -0.55
RFC1-210ENST00000505077 RYDENQ9NUL5 291 aaKnown RBP11.59□□□□□ -0.55
RFC1-210ENST00000505077 DDX41Q9UJV9 622 aaKnown RBP11.59□□□□□ -0.55
RFC1-210ENST00000505077 RCOR1Q9UKL0 485 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 FAM184BQ9ULE4 1060 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 Q9Y3F1 56 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 STK24Q9Y6E0 443 aa11.59□□□□□ -0.55
RFC1-210ENST00000505077 SEPT4O43236 478 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 SLC26A4O43511 780 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 PSMD10O75832 226 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 INHAP05111 366 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 ARP10275 920 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 TXNP10599 105 aaKnown RBP11.58□□□□□ -0.56
RFC1-210ENST00000505077 ELNP15502 786 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 SFNP31947 248 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 SEMA3FQ13275 785 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 PPP2R5CQ13362 524 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 CCDC144BQ3MJ40 725 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 ZNF746Q6NUN9 644 aaPredicted RBP11.58□□□□□ -0.56
RFC1-210ENST00000505077 METTL7BQ6UX53 244 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 DTHD1Q6ZMT9 781 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 EEPD1Q7L9B9 569 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 SMAP1Q8IYB5 467 aaPredicted RBP11.58□□□□□ -0.56
RFC1-210ENST00000505077 TMEM87AQ8NBN3 555 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 RDM1Q8NG50 284 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 LEO1Q8WVC0 666 aaPredicted RBP11.58□□□□□ -0.56
RFC1-210ENST00000505077 HAS1Q92839 578 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 TEKT3Q9BXF9 490 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 FTOQ9C0B1 505 aaKnown RBP eCLIP11.58□□□□□ -0.56
RFC1-210ENST00000505077 TMEM60Q9H2L4 133 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 PCDHA12Q9UN75 941 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 SRPRBQ9Y5M8 271 aaKnown RBP11.58□□□□□ -0.56
RFC1-210ENST00000505077 CLIC4Q9Y696 253 aa11.58□□□□□ -0.56
RFC1-210ENST00000505077 EVPLQ92817 2033 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 GOLGA6L22H0YM25 854 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 DUSP11O75319 330 aaKnown RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 FARP2O94887 1054 aaPredicted RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 GH1P01241 217 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 LONP1P36776 959 aaKnown RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 ADCYAP1R1P41586 468 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 JAK3P52333 1124 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 TNFAIP2Q03169 654 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 CEBPZQ03701 1054 aaKnown RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 CACNB2Q08289 660 aaPredicted RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 ITGB3BPQ13352 177 aaPredicted RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 LAMC2Q13753 1193 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 PDIA5Q14554 519 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 FOXD4L6Q3SYB3 417 aaPredicted RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 CELF3Q5SZQ8 465 aaKnown RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 FOXD4L3Q6VB84 417 aaPredicted RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 IGSF22Q8N9C0 903 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 KRI1Q8N9T8 703 aaKnown RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 ZNF579Q8NAF0 562 aaKnown RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 TTC12Q9H892 705 aaPredicted RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 HMX1Q9NP08 348 aaPredicted RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 SLC9A2Q9UBY0 812 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 VAV3Q9UKW4 847 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 DDX49Q9Y6V7 483 aaKnown RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 TRIP12Q14669 1992 aaPredicted RBP11.57□□□□□ -0.56
RFC1-210ENST00000505077 BRCA2P51587 3418 aa11.57□□□□□ -0.56
RFC1-210ENST00000505077 WDR64B1ANS9 1081 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 DHX15O43143 795 aaKnown RBP11.56□□□□□ -0.56
RFC1-210ENST00000505077 CUTAO60888 179 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 ARIH2O95376 493 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 GGPS1O95749 300 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 RARBP10826 455 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 CAPN2P17655 700 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 TXKP42681 527 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 ME1P48163 572 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 NKX3-2P78367 333 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 SP2Q02086 613 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 SPIRE1Q08AE8 756 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 BRDTQ58F21 947 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms