RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 GJB1P08034 283 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 EPB42P16452 691 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 NFKB1P19838 968 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 MX1P20591 662 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 CYP2B6P20813 491 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 HOXD10P28358 340 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 CDK8P49336 464 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 ICA1Q05084 483 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 PABPC4Q13310 644 aaKnown RBP eCLIP5.82□□□□□ -1.48
CDH9-203ENST00000505045 LRP8Q14114 963 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 TMEM164Q5U3C3 297 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 CATSPERGQ6ZRH7 1159 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 CCDC129Q6ZRS4 1044 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 RASGRP2Q7LDG7 609 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 APPBP2Q92624 585 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 USP6NLQ92738 828 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 COA7Q96BR5 231 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 DEFB118Q96PH6 123 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 UBE2OQ9C0C9 1292 aaKnown RBP5.82□□□□□ -1.48
CDH9-203ENST00000505045 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.82□□□□□ -1.48
CDH9-203ENST00000505045 GINM1Q9NU53 330 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 FLRT1Q9NZU1 646 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 BIN2Q9UBW5 565 aaPredicted RBP5.82□□□□□ -1.48
CDH9-203ENST00000505045 LCTP09848 1927 aa5.82□□□□□ -1.48
CDH9-203ENST00000505045 PRDM1O75626 825 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 HMGCRP04035 888 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 RSPO4Q2I0M5 234 aaPredicted RBP5.81□□□□□ -1.48
CDH9-203ENST00000505045 FAM26DQ5JW98 314 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 TMEM179Q6ZVK1 233 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 GPR142Q7Z601 462 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 GPRC5AQ8NFJ5 357 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 VTI1AQ96AJ9 217 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 TANGO6Q9C0B7 1094 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.81□□□□□ -1.48
CDH9-203ENST00000505045 SAP130Q9H0E3 1048 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 FBXO28Q9NVF7 368 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 CXXC1Q9P0U4 656 aaPredicted RBP5.81□□□□□ -1.48
CDH9-203ENST00000505045 TACC3Q9Y6A5 838 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 TTC41PQ6P2S7 1318 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 SPDYE3A6NKU9 549 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 H0YGN5 161 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 RNF113AO15541 343 aaKnown RBP5.81□□□□□ -1.48
CDH9-203ENST00000505045 PRMT3O60678 531 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 FARP2O94887 1054 aaPredicted RBP5.81□□□□□ -1.48
CDH9-203ENST00000505045 EEF2P13639 858 aaKnown RBP5.81□□□□□ -1.48
CDH9-203ENST00000505045 CCND3P30281 292 aaPredicted RBP5.81□□□□□ -1.48
CDH9-203ENST00000505045 UBXN2AP68543 259 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 MAP3K21Q5TCX8 1036 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 VPS53Q5VIR6 699 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 LBX2Q6XYB7 198 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 EXOC6Q8TAG9 804 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 CLP1Q92989 425 aaKnown RBP5.81□□□□□ -1.48
CDH9-203ENST00000505045 ATG4CQ96DT6 458 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 NUP88Q99567 741 aaPredicted RBP5.81□□□□□ -1.48
CDH9-203ENST00000505045 FSD1Q9BTV5 496 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 CABP5Q9NP86 173 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 ARPP21Q9UBL0 812 aaPredicted RBP5.81□□□□□ -1.48
CDH9-203ENST00000505045 SWAP70Q9UH65 585 aa5.81□□□□□ -1.48
CDH9-203ENST00000505045 LRRC37A2A6NM11 1700 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 A0A0D9SFI3 127 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 MINDY4BA8MYZ0 360 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 TNFRSF10BO14763 440 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 SGPL1O95470 568 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 IGHDP01880 384 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 TARSP26639 723 aaKnown RBP5.8□□□□□ -1.48
CDH9-203ENST00000505045 USP14P54578 494 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 ATP2B2Q01814 1243 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 HDAC1Q13547 482 aaPredicted RBP5.8□□□□□ -1.48
CDH9-203ENST00000505045 GRB14Q14449 540 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 ANKRD45Q5TZF3 282 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 WDR78Q5VTH9 848 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 ZSCAN25Q6NSZ9 544 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 CAPN12Q6ZSI9 719 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 TREML1Q86YW5 311 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 NPLOC4Q8TAT6 608 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 SOCS4Q8WXH5 440 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 PBXIP1Q96AQ6 731 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 GPATCH3Q96I76 525 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 APBA2Q99767 749 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 MOV10L1Q9BXT6 1211 aaKnown RBP5.8□□□□□ -1.48
CDH9-203ENST00000505045 LNPKQ9C0E8 428 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 VCPKMTQ9H867 229 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 INCENPQ9NQS7 918 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 TMX2Q9Y320 296 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 RABGAP1Q9Y3P9 1069 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 KCNMB2Q9Y691 235 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 LTBP2Q14767 1821 aa5.8□□□□□ -1.48
CDH9-203ENST00000505045 PFASO15067 1338 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 IGKV6D-41A0A0C4DH26 115 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 FAM229AH3BQW9 127 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 LILRB5O75023 590 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 FLOT1O75955 427 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 GLRX3O76003 335 aaKnown RBP5.79□□□□□ -1.48
CDH9-203ENST00000505045 IGHA2P01877 340 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 ZKSCAN1P17029 563 aaPredicted RBP5.79□□□□□ -1.48
CDH9-203ENST00000505045 MAPK4P31152 587 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 TDO2P48775 406 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 AFF1P51825 1210 aaKnown RBP5.79□□□□□ -1.48
CDH9-203ENST00000505045 PDE1AP54750 535 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 CACNB2Q08289 660 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms