RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 LRRC2Q9BYS8 371 aa6.57□□□□□ -1.36
SNX25-203ENST00000504959 SMG9Q9H0W8 520 aaKnown RBP6.57□□□□□ -1.36
SNX25-203ENST00000504959 CAAP1Q9H8G2 361 aa6.57□□□□□ -1.36
SNX25-203ENST00000504959 KIF3AQ9Y496 699 aa6.57□□□□□ -1.36
SNX25-203ENST00000504959 CHD4Q14839 1912 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 FAM181BA6NEQ2 426 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 MSNP26038 577 aaKnown RBP6.56□□□□□ -1.36
SNX25-203ENST00000504959 CRKLP46109 303 aaKnown RBP6.56□□□□□ -1.36
SNX25-203ENST00000504959 NFKB2Q00653 900 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 COL9A3Q14050 684 aaPredicted RBP6.56□□□□□ -1.36
SNX25-203ENST00000504959 LONRF2Q1L5Z9 754 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 SCARA3Q6AZY7 606 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 CDC37L1Q7L3B6 337 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 ZNF34Q8IZ26 560 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 MICALL1Q8N3F8 863 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 OSBP2Q969R2 916 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 MPHOSPH8Q99549 860 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 NCOA5Q9HCD5 579 aaKnown RBP6.56□□□□□ -1.36
SNX25-203ENST00000504959 SLC12A7Q9Y666 1083 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 ARAP2Q8WZ64 1704 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 RIC1Q4ADV7 1423 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 MROH5Q6ZUA9 1318 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 PDE8BO95263 885 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 UQCRFS1P1P0C7P4 283 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 CDC25BP30305 580 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 TERF1P54274 439 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 GLIPR1L2Q4G1C9 344 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 CT47A1Q5JQC4 288 aaPredicted RBP6.56□□□□□ -1.36
SNX25-203ENST00000504959 YOD1Q5VVQ6 348 aaPredicted RBP6.56□□□□□ -1.36
SNX25-203ENST00000504959 STOX1Q6ZVD7 989 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 DDX11Q96FC9 970 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 CLUHP3Q96NS8 147 aa6.56□□□□□ -1.36
SNX25-203ENST00000504959 LLPHQ9BRT6 129 aaKnown RBP6.56□□□□□ -1.36
SNX25-203ENST00000504959 UTP14AQ9BVJ6 771 aaKnown RBP6.56□□□□□ -1.36
SNX25-203ENST00000504959 SCAND2PQ9GZW5 306 aaPredicted RBP6.56□□□□□ -1.36
SNX25-203ENST00000504959 NOL7Q9UMY1 257 aaKnown RBP6.56□□□□□ -1.36
SNX25-203ENST00000504959 DDX60Q8IY21 1712 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 LAMB2P55268 1798 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 UBN2Q6ZU65 1347 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 MYH14Q7Z406 1995 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 ZNF213O14771 459 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 PFKFB2O60825 505 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 IDH1O75874 414 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 APPP05067 770 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 VSIG8P0DPA2 414 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 SLC5A1P13866 664 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 PLCG1P19174 1290 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 POLR2BP30876 1174 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 MCAMP43121 646 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 EIF5P55010 431 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 PCBP4P57723 403 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 HAND2P61296 217 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 CCT2P78371 535 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 HMGN5P82970 282 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 SCRN1Q12765 414 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 AP3B2Q13367 1082 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 PUM3Q15397 648 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 CCDC152Q4G0S7 254 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 PARP10Q53GL7 1025 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 SLC9C2Q5TAH2 1124 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 MEX3CQ5U5Q3 659 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 SUSD4Q5VX71 490 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 RALYLQ86SE5 291 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 LRRC47Q8N1G4 583 aaKnown RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 CCDC155Q8N6L0 562 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 MARCH10Q8NA82 808 aaPredicted RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 RNF214Q8ND24 703 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 LPIN2Q92539 896 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 PMM1Q92871 262 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 SMARCC1Q92922 1105 aaPredicted RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 KISS1RQ969F8 398 aaPredicted RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 ZSCAN16Q9H4T2 348 aaPredicted RBP6.55□□□□□ -1.36
SNX25-203ENST00000504959 KLHL3Q9UH77 587 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 SLC6A14Q9UN76 642 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 ZNF652Q9Y2D9 606 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 CASZ1Q86V15 1759 aa6.55□□□□□ -1.36
SNX25-203ENST00000504959 SPATA31A5Q5VU36 1347 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 SPATA31A7Q8IWB4 1347 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 GSG1L2A8MUP6 293 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 GPAA1O43292 621 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 ZNF500O60304 480 aaPredicted RBP6.54□□□□□ -1.36
SNX25-203ENST00000504959 JAK2O60674 1132 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 FGAP02671 866 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 MCM5P33992 734 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 IGHMBP2P38935 993 aaKnown RBP6.54□□□□□ -1.36
SNX25-203ENST00000504959 GSTM4Q03013 218 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 TRDNQ13061 729 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 PCSK7Q16549 785 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 FAM209AQ5JX71 171 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 TTLL5Q6EMB2 1281 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 GDF6Q6KF10 455 aaPredicted RBP6.54□□□□□ -1.36
SNX25-203ENST00000504959 INTS5Q6P9B9 1019 aaKnown RBP6.54□□□□□ -1.36
SNX25-203ENST00000504959 CHST3Q7LGC8 479 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 NCOA7Q8NI08 942 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 ZNF526Q8TF50 670 aaPredicted RBP6.54□□□□□ -1.36
SNX25-203ENST00000504959 ZNF274Q96GC6 653 aaPredicted RBP6.54□□□□□ -1.36
SNX25-203ENST00000504959 ZNF512BQ96KM6 892 aaPredicted RBP6.54□□□□□ -1.36
SNX25-203ENST00000504959 LPIN3Q9BQK8 851 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 TARS2Q9BW92 718 aaKnown RBP6.54□□□□□ -1.36
SNX25-203ENST00000504959 PUS7LQ9H0K6 701 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms