RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 SENP7Q9BQF6 1050 aa23.01■■□□□ 1.27
HERC6-205ENST00000504905 PRKAG2Q9UGJ0 569 aa23.01■■□□□ 1.27
HERC6-205ENST00000504905 ATP11BQ9Y2G3 1177 aa23.01■■□□□ 1.27
HERC6-205ENST00000504905 A0A0U1RQG5 324 aaPredicted RBP23■■□□□ 1.27
HERC6-205ENST00000504905 MAFGO15525 162 aa23■■□□□ 1.27
HERC6-205ENST00000504905 FOSBP53539 338 aa23■■□□□ 1.27
HERC6-205ENST00000504905 PURAQ00577 322 aaKnown RBP23■■□□□ 1.27
HERC6-205ENST00000504905 TRIM29Q14134 588 aa23■■□□□ 1.27
HERC6-205ENST00000504905 C1orf53Q5VUE5 145 aa23■■□□□ 1.27
HERC6-205ENST00000504905 GIMAP8Q8ND71 665 aaPredicted RBP23■■□□□ 1.27
HERC6-205ENST00000504905 CRYGNQ8WXF5 182 aa23■■□□□ 1.27
HERC6-205ENST00000504905 TMX3Q96JJ7 454 aa23■■□□□ 1.27
HERC6-205ENST00000504905 MTG1Q9BT17 334 aaPredicted RBP23■■□□□ 1.27
HERC6-205ENST00000504905 M0R2N6 131 aa22.99■■□□□ 1.27
HERC6-205ENST00000504905 DGKDQ16760 1214 aa22.99■■□□□ 1.27
HERC6-205ENST00000504905 TRIM60Q495X7 471 aa22.99■■□□□ 1.27
HERC6-205ENST00000504905 METTL7BQ6UX53 244 aa22.99■■□□□ 1.27
HERC6-205ENST00000504905 CYFIP1Q7L576 1253 aa22.99■■□□□ 1.27
HERC6-205ENST00000504905 CYP2W1Q8TAV3 490 aa22.99■■□□□ 1.27
HERC6-205ENST00000504905 BRMS1Q9HCU9 246 aa22.99■■□□□ 1.27
HERC6-205ENST00000504905 PKD2L1Q9P0L9 805 aa22.99■■□□□ 1.27
HERC6-205ENST00000504905 LTBP2Q14767 1821 aa22.98■■□□□ 1.27
HERC6-205ENST00000504905 KCNA2P16389 499 aa22.98■■□□□ 1.27
HERC6-205ENST00000504905 HSDL1Q3SXM5 330 aa22.98■■□□□ 1.27
HERC6-205ENST00000504905 NIPA1Q7RTP0 329 aa22.98■■□□□ 1.27
HERC6-205ENST00000504905 KRT25Q7Z3Z0 450 aa22.98■■□□□ 1.27
HERC6-205ENST00000504905 FAM184AQ8NB25 1140 aa22.98■■□□□ 1.27
HERC6-205ENST00000504905 BCAS3Q9H6U6 928 aa22.98■■□□□ 1.27
HERC6-205ENST00000504905 KCNH7Q9NS40 1196 aa22.98■■□□□ 1.27
HERC6-205ENST00000504905 CCDC194A0A1B0GVG4 234 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 FAM86B1E9PN63 330 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 MEIS1O00470 390 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 NOP56O00567 594 aaKnown RBP22.97■■□□□ 1.27
HERC6-205ENST00000504905 ATP9AO75110 1047 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 FAM86B2P0C5J1 330 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 KRT2P35908 639 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 PSMC6P62333 389 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 ITGA7Q13683 1181 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 NONOQ15233 471 aaKnown RBP eCLIP22.97■■□□□ 1.27
HERC6-205ENST00000504905 ZNF697Q5TEC3 545 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 PLA2G4DQ86XP0 818 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 TBCKQ8TEA7 893 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 FAM161BQ96MY7 647 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 SCN10AQ9Y5Y9 1956 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 MROH7Q68CQ1 1323 aa22.97■■□□□ 1.27
HERC6-205ENST00000504905 ARVCFO00192 962 aa22.96■■□□□ 1.27
HERC6-205ENST00000504905 PQBP1O60828 265 aaKnown RBP22.96■■□□□ 1.27
HERC6-205ENST00000504905 ARP10275 920 aa22.96■■□□□ 1.27
HERC6-205ENST00000504905 USP11P51784 963 aa22.96■■□□□ 1.27
HERC6-205ENST00000504905 TLE2Q04725 743 aa22.96■■□□□ 1.27
HERC6-205ENST00000504905 KRT40Q6A162 431 aa22.96■■□□□ 1.27
HERC6-205ENST00000504905 OXER1Q8TDS5 423 aa22.96■■□□□ 1.27
HERC6-205ENST00000504905 PPFIA4O75335 1185 aa22.95■■□□□ 1.26
HERC6-205ENST00000504905 MMP1P03956 469 aa22.95■■□□□ 1.26
HERC6-205ENST00000504905 CIITAP33076 1130 aa22.95■■□□□ 1.26
HERC6-205ENST00000504905 SETQ01105 290 aaPredicted RBP22.95■■□□□ 1.26
HERC6-205ENST00000504905 SP4Q02446 784 aa22.95■■□□□ 1.26
HERC6-205ENST00000504905 C8orf76Q96K31 380 aa22.95■■□□□ 1.26
HERC6-205ENST00000504905 SDF4Q9BRK5 362 aa22.95■■□□□ 1.26
HERC6-205ENST00000504905 SEZ6LQ9BYH1 1024 aa22.95■■□□□ 1.26
HERC6-205ENST00000504905 AGO4Q9HCK5 861 aaKnown RBP22.95■■□□□ 1.26
HERC6-205ENST00000504905 EYSQ5T1H1 3165 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 GRIN2DO15399 1336 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 IGLV3-22A0A075B6J6 115 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 DCDC2CA8MYV0 355 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 ZNF286BP0CG31 522 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 HOXD8P13378 290 aaPredicted RBP22.94■■□□□ 1.26
HERC6-205ENST00000504905 CDK7P50613 346 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 CHMP4BP1P59074 171 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 SHHQ15465 462 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 PRR16Q569H4 304 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 ANKRD33Q7Z3H0 272 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 SLC43A3Q8NBI5 491 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 TOX2Q96NM4 488 aa22.94■■□□□ 1.26
HERC6-205ENST00000504905 NFASCO94856 1347 aa22.93■■□□□ 1.26
HERC6-205ENST00000504905 GUCY1B3Q02153 619 aa22.93■■□□□ 1.26
HERC6-205ENST00000504905 SAFBQ15424 915 aaKnown RBP eCLIP22.93■■□□□ 1.26
HERC6-205ENST00000504905 INF2Q27J81 1249 aa22.93■■□□□ 1.26
HERC6-205ENST00000504905 PIK3AP1Q6ZUJ8 805 aa22.93■■□□□ 1.26
HERC6-205ENST00000504905 CDX2Q99626 313 aaPredicted RBP22.93■■□□□ 1.26
HERC6-205ENST00000504905 GPR20Q99678 358 aa22.93■■□□□ 1.26
HERC6-205ENST00000504905 KATNAL1Q9BW62 490 aa22.93■■□□□ 1.26
HERC6-205ENST00000504905 JPH1Q9HDC5 661 aaPredicted RBP22.93■■□□□ 1.26
HERC6-205ENST00000504905 KIF3AQ9Y496 699 aa22.93■■□□□ 1.26
HERC6-205ENST00000504905 NR5A1Q13285 461 aa22.92■■□□□ 1.26
HERC6-205ENST00000504905 NBPF20Q3BBV1 942 aa22.92■■□□□ 1.26
HERC6-205ENST00000504905 DIS3L2Q8IYB7 885 aaKnown RBP22.92■■□□□ 1.26
HERC6-205ENST00000504905 KAT2BQ92831 832 aa22.92■■□□□ 1.26
HERC6-205ENST00000504905 SEMA6BQ9H3T3 888 aa22.92■■□□□ 1.26
HERC6-205ENST00000504905 PRDM5Q9NQX1 630 aaPredicted RBP22.92■■□□□ 1.26
HERC6-205ENST00000504905 SLC9A2Q9UBY0 812 aa22.92■■□□□ 1.26
HERC6-205ENST00000504905 BTBD18B2RXH4 712 aa22.91■■□□□ 1.26
HERC6-205ENST00000504905 IPO5O00410 1097 aaKnown RBP22.91■■□□□ 1.26
HERC6-205ENST00000504905 TLR3O15455 904 aaKnown RBP22.91■■□□□ 1.26
HERC6-205ENST00000504905 EDIL3O43854 480 aa22.91■■□□□ 1.26
HERC6-205ENST00000504905 F2P00734 622 aa22.91■■□□□ 1.26
HERC6-205ENST00000504905 CLTBP09497 229 aa22.91■■□□□ 1.26
HERC6-205ENST00000504905 ITGB3BPQ13352 177 aaPredicted RBP22.91■■□□□ 1.26
HERC6-205ENST00000504905 FAM47CQ5HY64 1035 aa22.91■■□□□ 1.26
HERC6-205ENST00000504905 C9orf50Q5SZB4 431 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms