RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 NASPP49321 788 aaPredicted RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 HSDL1Q3SXM5 330 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 EEPD1Q7L9B9 569 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 BRAPQ7Z569 592 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 TRMT44Q8IYL2 757 aaKnown RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 KLHDC9Q8NEP7 349 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 COPS5Q92905 334 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 USP28Q96RU2 1077 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 UPF3AQ9H1J1 476 aaKnown RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 AGO4Q9HCK5 861 aaKnown RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 RTEL1Q9NZ71 1219 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 KIF3AQ9Y496 699 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 SIP14410 1827 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 CCDC194A0A1B0GVG4 234 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 VPS37CA5D8V6 355 aaPredicted RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 A6NJR5 290 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 TTLL13PA6NNM8 815 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 FIBPO43427 364 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 STBD1O95210 358 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 CCND2P30279 289 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 ANP32AP39687 249 aaKnown RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 ATP2C1P98194 919 aaPredicted RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 GRIN1Q05586 938 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 ORC2Q13416 577 aaPredicted RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 MTMR1Q13613 665 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 LY6KQ17RY6 165 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 LETM2Q2VYF4 491 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 RILPL1Q5EBL4 403 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 IQSEC1Q6DN90 963 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 CLEC17AQ6ZS10 378 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 CCAR1Q8IX12 1150 aaKnown RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 IGSF22Q8N9C0 903 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 RAET1EQ8TD07 263 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 LRRC15Q8TF66 581 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 SCFD2Q8WU76 684 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 PCYT2Q99447 389 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 UNC93B1Q9H1C4 597 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 ZSCAN16Q9H4T2 348 aaPredicted RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 POLR3EQ9NVU0 708 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 SLC5A4Q9NY91 659 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 OGDHLQ9ULD0 1010 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 CIZ1Q9ULV3 898 aaPredicted RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 Q9Y3F1 56 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 CLIC4Q9Y696 253 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 NFASCO94856 1347 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 SYNRGQ9UMZ2 1314 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 GSTTP1A0A1W2PQM5 241 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 IPO5O00410 1097 aaKnown RBP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 TBX3O15119 743 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 DUSP11O75319 330 aaKnown RBP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 MYCLP12524 364 aaPredicted RBP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 AKR1A1P14550 325 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 GCFC2P16383 781 aaKnown RBP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 CST5P28325 142 aaPredicted RBP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 GJA9P57773 515 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 PDE4DQ08499 809 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 PPP2R5CQ13362 524 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 TRIM29Q14134 588 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 ARHGEF6Q15052 776 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 SLC9C1Q4G0N8 1177 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 PRR16Q569H4 304 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 TTC38Q5R3I4 469 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 CELF3Q5SZQ8 465 aaKnown RBP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 AXDND1Q5T1B0 1012 aaPredicted RBP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 LINC00301Q8NCQ3 95 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 CTAGE1Q96RT6 745 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 C16orf70Q9BSU1 422 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 MMTAG2Q9BU76 263 aaKnown RBP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 WRAP73Q9P2S5 460 aaPredicted RBP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 DDX20Q9UHI6 824 aaKnown RBP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 DDX25Q9UHL0 483 aaKnown RBP5.61□□□□□ -1.51
LMNB1-208ENST00000504788 GRIN2DO15399 1336 aa5.61□□□□□ -1.51
LMNB1-208ENST00000504788 LOXHD1Q8IVV2 1947 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 H3BQV1 296 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 HAS3O00219 553 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 EML1O00423 815 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 CCNT1O60563 726 aaKnown RBP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 LGR5O75473 907 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 GJB1P08034 283 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 COL6A1P12109 1028 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 CCL5P13501 91 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 ATP4AP20648 1035 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 HOXC8P31273 242 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 PRPHP41219 470 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 SETQ01105 290 aaPredicted RBP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 TNFAIP2Q03169 654 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 DNM1Q05193 864 aaKnown RBP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 PTGDRQ13258 359 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 SLC39A14Q15043 492 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 SAFBQ15424 915 aaKnown RBP eCLIP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 SF3A1Q15459 793 aaKnown RBP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 ZNF174Q15697 407 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 IFFO2Q5TF58 517 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 MFSD14CQ5VZR4 134 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 METTL7BQ6UX53 244 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 ABHD15Q6UXT9 468 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 SEPT14Q6ZU15 432 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 PLA2G4DQ86XP0 818 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 KAT2BQ92831 832 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms