RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 TRAPPC10P48553 1259 aa20.62■□□□□ 0.89
DDR1-254ENST00000504679 NECAB2Q7Z6G3 386 aa20.62■□□□□ 0.89
DDR1-254ENST00000504679 AFG1LQ8WV93 481 aa20.62■□□□□ 0.89
DDR1-254ENST00000504679 BCAS3Q9H6U6 928 aa20.62■□□□□ 0.89
DDR1-254ENST00000504679 TBC1D22BQ9NU19 505 aa20.62■□□□□ 0.89
DDR1-254ENST00000504679 POLR3EQ9NVU0 708 aa20.62■□□□□ 0.89
DDR1-254ENST00000504679 FRMPD3Q5JV73 1810 aa20.62■□□□□ 0.89
DDR1-254ENST00000504679 MYADML2A6NDP7 307 aa20.61■□□□□ 0.89
DDR1-254ENST00000504679 MOXD2PA6NHM9 499 aa20.61■□□□□ 0.89
DDR1-254ENST00000504679 NOP56O00567 594 aaKnown RBP20.61■□□□□ 0.89
DDR1-254ENST00000504679 MARCH6O60337 910 aa20.61■□□□□ 0.89
DDR1-254ENST00000504679 SORBS3O60504 671 aa20.61■□□□□ 0.89
DDR1-254ENST00000504679 PPFIA4O75335 1185 aa20.61■□□□□ 0.89
DDR1-254ENST00000504679 FARP2O94887 1054 aaPredicted RBP20.61■□□□□ 0.89
DDR1-254ENST00000504679 IRX5P78411 483 aaPredicted RBP20.61■□□□□ 0.89
DDR1-254ENST00000504679 CCSAPQ6IQ19 270 aaPredicted RBP20.61■□□□□ 0.89
DDR1-254ENST00000504679 PPTC7Q8NI37 304 aa20.61■□□□□ 0.89
DDR1-254ENST00000504679 LENG9Q96B70 501 aa20.61■□□□□ 0.89
DDR1-254ENST00000504679 PAWRQ96IZ0 340 aaKnown RBP20.61■□□□□ 0.89
DDR1-254ENST00000504679 DAXXQ9UER7 740 aaPredicted RBP20.61■□□□□ 0.89
DDR1-254ENST00000504679 BRCA2P51587 3418 aa20.61■□□□□ 0.89
DDR1-254ENST00000504679 MSH4O15457 936 aa20.6■□□□□ 0.89
DDR1-254ENST00000504679 BAG4O95429 457 aaKnown RBP20.6■□□□□ 0.89
DDR1-254ENST00000504679 ASGR1P07306 291 aa20.6■□□□□ 0.89
DDR1-254ENST00000504679 ANP32AP39687 249 aaKnown RBP20.6■□□□□ 0.89
DDR1-254ENST00000504679 MNX1P50219 401 aaPredicted RBP20.6■□□□□ 0.89
DDR1-254ENST00000504679 ACLYP53396 1101 aa20.6■□□□□ 0.89
DDR1-254ENST00000504679 DGKDQ16760 1214 aa20.6■□□□□ 0.89
DDR1-254ENST00000504679 HSDL1Q3SXM5 330 aa20.6■□□□□ 0.89
DDR1-254ENST00000504679 BRAPQ7Z569 592 aa20.6■□□□□ 0.89
DDR1-254ENST00000504679 VTI1AQ96AJ9 217 aa20.6■□□□□ 0.89
DDR1-254ENST00000504679 FAM20AQ96MK3 541 aa20.6■□□□□ 0.89
DDR1-254ENST00000504679 SENP6Q9GZR1 1112 aaPredicted RBP20.6■□□□□ 0.89
DDR1-254ENST00000504679 SLC9A2Q9UBY0 812 aa20.6■□□□□ 0.89
DDR1-254ENST00000504679 PHF24Q9UPV7 400 aa20.6■□□□□ 0.89
DDR1-254ENST00000504679 TBX3O15119 743 aa20.59■□□□□ 0.89
DDR1-254ENST00000504679 CABYRO75952 493 aa20.59■□□□□ 0.89
DDR1-254ENST00000504679 MYL3P08590 195 aa20.59■□□□□ 0.89
DDR1-254ENST00000504679 ITGB3BPQ13352 177 aaPredicted RBP20.59■□□□□ 0.89
DDR1-254ENST00000504679 RILPL1Q5EBL4 403 aa20.59■□□□□ 0.89
DDR1-254ENST00000504679 SEPT1Q8WYJ6 367 aa20.59■□□□□ 0.89
DDR1-254ENST00000504679 UIMC1Q96RL1 719 aa20.59■□□□□ 0.89
DDR1-254ENST00000504679 RIT2Q99578 217 aa20.59■□□□□ 0.89
DDR1-254ENST00000504679 C11orf49Q9H6J7 331 aa20.59■□□□□ 0.89
DDR1-254ENST00000504679 JPH1Q9HDC5 661 aaPredicted RBP20.59■□□□□ 0.89
DDR1-254ENST00000504679 TCEAL9Q9UHQ7 104 aa20.59■□□□□ 0.89
DDR1-254ENST00000504679 MTMR6Q9Y217 621 aa20.59■□□□□ 0.89
DDR1-254ENST00000504679 DHX15O43143 795 aaKnown RBP20.58■□□□□ 0.89
DDR1-254ENST00000504679 CAPN15O75808 1086 aa20.58■□□□□ 0.89
DDR1-254ENST00000504679 MMP3P08254 477 aa20.58■□□□□ 0.89
DDR1-254ENST00000504679 ORC2Q13416 577 aaPredicted RBP20.58■□□□□ 0.89
DDR1-254ENST00000504679 TTC38Q5R3I4 469 aa20.58■□□□□ 0.89
DDR1-254ENST00000504679 SLC5A5Q92911 643 aa20.58■□□□□ 0.89
DDR1-254ENST00000504679 FERMT2Q96AC1 680 aa20.58■□□□□ 0.89
DDR1-254ENST00000504679 GLT1D1Q96MS3 346 aa20.58■□□□□ 0.89
DDR1-254ENST00000504679 GPR20Q99678 358 aa20.58■□□□□ 0.89
DDR1-254ENST00000504679 ZSCAN16Q9H4T2 348 aaPredicted RBP20.58■□□□□ 0.89
DDR1-254ENST00000504679 SLC37A4O43826 429 aa20.57■□□□□ 0.88
DDR1-254ENST00000504679 NEMFO60524 1076 aa20.57■□□□□ 0.88
DDR1-254ENST00000504679 GAS7O60861 476 aa20.57■□□□□ 0.88
DDR1-254ENST00000504679 MCM7P33993 719 aa20.57■□□□□ 0.88
DDR1-254ENST00000504679 SP4Q02446 784 aa20.57■□□□□ 0.88
DDR1-254ENST00000504679 ZNF174Q15697 407 aa20.57■□□□□ 0.88
DDR1-254ENST00000504679 LRCH2Q5VUJ6 765 aa20.57■□□□□ 0.88
DDR1-254ENST00000504679 FERMT3Q86UX7 667 aa20.57■□□□□ 0.88
DDR1-254ENST00000504679 SLFN12Q8IYM2 578 aa20.57■□□□□ 0.88
DDR1-254ENST00000504679 DIS3LQ8TF46 1054 aaKnown RBP20.57■□□□□ 0.88
DDR1-254ENST00000504679 MTG1Q9BT17 334 aaPredicted RBP20.57■□□□□ 0.88
DDR1-254ENST00000504679 DOCK5Q9H7D0 1870 aa20.56■□□□□ 0.88
DDR1-254ENST00000504679 A0A1W2PQ45 241 aaPredicted RBP20.56■□□□□ 0.88
DDR1-254ENST00000504679 A0A1W2PQY0 241 aa20.56■□□□□ 0.88
DDR1-254ENST00000504679 DDX39AO00148 427 aaKnown RBP20.56■□□□□ 0.88
DDR1-254ENST00000504679 COL6A1P12109 1028 aa20.56■□□□□ 0.88
DDR1-254ENST00000504679 TOB1P50616 345 aaPredicted RBP20.56■□□□□ 0.88
DDR1-254ENST00000504679 PURAQ00577 322 aaKnown RBP20.56■□□□□ 0.88
DDR1-254ENST00000504679 KRT76Q01546 638 aa20.56■□□□□ 0.88
DDR1-254ENST00000504679 CALCRLQ16602 461 aa20.56■□□□□ 0.88
DDR1-254ENST00000504679 CXCL17Q6UXB2 119 aa20.56■□□□□ 0.88
DDR1-254ENST00000504679 UBE2Q1Q7Z7E8 422 aa20.56■□□□□ 0.88
DDR1-254ENST00000504679 ETNPPLQ8TBG4 499 aa20.56■□□□□ 0.88
DDR1-254ENST00000504679 TEKT3Q9BXF9 490 aa20.56■□□□□ 0.88
DDR1-254ENST00000504679 KCNMB3Q9NPA1 279 aa20.56■□□□□ 0.88
DDR1-254ENST00000504679 ELP1O95163 1332 aa20.55■□□□□ 0.88
DDR1-254ENST00000504679 GSTTP1A0A1W2PQM5 241 aa20.55■□□□□ 0.88
DDR1-254ENST00000504679 PSMD10O75832 226 aa20.55■□□□□ 0.88
DDR1-254ENST00000504679 ACTR2P61160 394 aa20.55■□□□□ 0.88
DDR1-254ENST00000504679 ZNF746Q6NUN9 644 aaPredicted RBP20.55■□□□□ 0.88
DDR1-254ENST00000504679 POTEDQ86YR6 584 aa20.55■□□□□ 0.88
DDR1-254ENST00000504679 STARD7Q9NQZ5 370 aa20.55■□□□□ 0.88
DDR1-254ENST00000504679 WNT7AO00755 349 aa20.54■□□□□ 0.88
DDR1-254ENST00000504679 ATG7O95352 703 aa20.54■□□□□ 0.88
DDR1-254ENST00000504679 HOXD8P13378 290 aaPredicted RBP20.54■□□□□ 0.88
DDR1-254ENST00000504679 TCF7P36402 384 aaPredicted RBP20.54■□□□□ 0.88
DDR1-254ENST00000504679 UTP14CQ5TAP6 766 aaKnown RBP20.54■□□□□ 0.88
DDR1-254ENST00000504679 SMAP1Q8IYB5 467 aaPredicted RBP20.54■□□□□ 0.88
DDR1-254ENST00000504679 HAS1Q92839 578 aa20.54■□□□□ 0.88
DDR1-254ENST00000504679 GJA10Q969M2 543 aa20.54■□□□□ 0.88
DDR1-254ENST00000504679 SEZ6LQ9BYH1 1024 aa20.54■□□□□ 0.88
DDR1-254ENST00000504679 PCDHA12Q9UN75 941 aa20.54■□□□□ 0.88
DDR1-254ENST00000504679 SAMM50Q9Y512 469 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms