RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 GOLGA8DPQ0D2H9 430 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 DNAJC24Q6P3W2 148 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 SLC10A4Q96EP9 437 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 PPP1R13BQ96KQ4 1090 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 GSDMAQ96QA5 445 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 PALLDQ8WX93 1383 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 BAG2O95816 211 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 MYCP01106 439 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 HOXA13P31271 388 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 PDE1BQ01064 536 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 DBN1Q16643 649 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 NSUN7Q8NE18 718 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 ZNF341Q9BYN7 854 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 NXF1Q9UBU9 619 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 ZCCHC11Q5TAX3 1644 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 ERVK-7P63135 1459 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 GFPT2O94808 682 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 EEF1GP26641 437 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 GUCY2DQ02846 1103 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 CTTNQ14247 550 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 IQCB1Q15051 598 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 MAN2A1Q16706 1144 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 SMAP1Q8IYB5 467 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 GRAMD1CQ8IYS0 662 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 C7orf31Q8N865 590 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 FAM133AQ8N9E0 248 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 FAM71BQ8TC56 605 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 CAPS2Q9BXY5 557 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 PIH1D3Q9NQM4 214 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 BAG5Q9UL15 447 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 USH1CQ9Y6N9 552 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 EFCAB8A8MWE9 144 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 PLA2G4BP0C869 781 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 COG7P83436 770 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 ARHGAP4P98171 946 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 SURF1Q15526 300 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 CCDC38Q502W7 563 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 SGO2Q562F6 1265 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 MCUQ8NE86 351 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 FBXO18Q8NFZ0 1043 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 DCAF4Q8WV16 495 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 SDCCAG3Q96C92 435 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 SPZ1Q9BXG8 430 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 COA1Q9GZY4 146 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 VCX3AQ9NNX9 186 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 BSDC1Q9NW68 430 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 RWDD2AQ9UIY3 292 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 PPME1Q9Y570 386 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 GOLGA8QA0A0J9YX86 632 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 GOLGA8OA6NCC3 632 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 GOLGA8NF8WBI6 632 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 ZNF853P0CG23 659 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 CD58P19256 250 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 IL1RL1Q01638 556 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 ASPHQ12797 758 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 SUSD4Q5VX71 490 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 DSTYKQ6XUX3 929 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 SEPT12Q8IYM1 358 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 ATP6V1E2Q96A05 226 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 MRFAP1L1Q96HT8 127 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 LRRC4Q9HBW1 653 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 PNMA3Q9UL41 463 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 CYP2D7A0A087X1C5 515 aa7.77□□□□□ -1.16
SYNPO2-205ENST00000504178 SRGAP2CP0DJJ0 459 aa7.77□□□□□ -1.16
SYNPO2-205ENST00000504178 MAGI2Q86UL8 1455 aa7.77□□□□□ -1.16
SYNPO2-205ENST00000504178 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.77□□□□□ -1.16
SYNPO2-205ENST00000504178 MSTO1Q9BUK6 570 aa7.77□□□□□ -1.16
SYNPO2-205ENST00000504178 THAP9Q9H5L6 903 aa7.77□□□□□ -1.16
SYNPO2-205ENST00000504178 POLR3EQ9NVU0 708 aa7.77□□□□□ -1.16
SYNPO2-205ENST00000504178 ROBO2Q9HCK4 1378 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 CYP21A2P08686 494 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 GABPB1Q06547 395 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 C2orf54Q08AI8 447 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 RNF207Q6ZRF8 634 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 TTLL6Q8N841 843 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 SH3RF3Q8TEJ3 882 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 DEPDC1BQ8WUY9 529 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 TTC1Q99614 292 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 PARVGQ9HBI0 331 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 RRAGDQ9NQL2 400 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 BAIAP2L1Q9UHR4 511 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 SPDYE2BA6NHP3 402 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 MOCS3O95396 460 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 SPDYE6P0CI01 402 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 ATXN8OSP0DMR3 200 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 SEPT2Q15019 361 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 TMED2Q15363 201 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 MAGOHBQ96A72 148 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 CLGNO14967 610 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 PRPSAP2O60256 369 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 ECEL1O95672 775 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 STX1BP61266 288 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 KIF23Q02241 960 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 PDXDC2PQ6P474 469 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 ELMSAN1Q6PJG2 1045 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 PI16Q6UXB8 463 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 ANKRD13CQ8N6S4 541 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 FAM8A1Q9UBU6 413 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 SLC8A2Q9UPR5 921 aa7.77□□□□□ -1.17
SYNPO2-205ENST00000504178 TTC4O95801 387 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms