RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SUN1O94901 812 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 PRPSAP1Q14558 356 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 MUM1Q2TAK8 710 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 FAM160B2Q86V87 743 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 ACRBPQ8NEB7 543 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 STAG1Q8WVM7 1258 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 INO80Q9ULG1 1556 aaPredicted RBP17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 SOWAHDA6NJG2 315 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 NDUFA10O95299 355 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 ECEL1O95672 775 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 CDC25AP30304 524 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 CEP120Q8N960 986 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 IPO11Q9UI26 975 aaKnown RBP17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 MEIS1O00470 390 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 EIF4A3P38919 411 aaKnown RBP17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 CDK8P49336 464 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 SGO2Q562F6 1265 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 CLEC4GQ6UXB4 293 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 CCDC68Q9H2F9 335 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 NDST4Q9H3R1 872 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 CPSF2Q9P2I0 782 aaKnown RBP17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 A0A087WWV3 80 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 KIF3CO14782 793 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 SUPT20HL1Q3ZLR7 823 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 SUSD4Q5VX71 490 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 ARHGAP27Q6ZUM4 889 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 RPS6KC1Q96S38 1066 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 EFCC1Q9HA90 598 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 CYP2D7A0A087X1C5 515 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 KIF22Q14807 665 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 MUM1L1Q5H9M0 696 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 KCTD16Q68DU8 428 aa17.93■□□□□ 0.46
PCDHA1-203ENST00000504120 LRRN2O75325 713 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 GFPT2O94808 682 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 TCP11X2Q5H9J9 407 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 RESP18Q5W5W9 173 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 FOXP4Q8IVH2 680 aaPredicted RBP17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 BEGAINQ9BUH8 593 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 CCDC151A5D8V7 595 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 INO80B-WBP1J3KQ70 363 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 MCAMP43121 646 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 AIFM3Q96NN9 605 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 HINFPQ9BQA5 517 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 INO80BQ9C086 356 aaPredicted RBP17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 POC1B-GALNT4F8VUJ3 575 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 SLC8A1P32418 973 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 DIXDC1Q155Q3 683 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 PCIF1Q9H4Z3 704 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 QTRT2Q9H974 415 aaKnown RBP17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 USP17L3A6NCW0 530 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 USP17L4A6NCW7 530 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 ABL1P00519 1130 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 USP17L1Q7RTZ2 530 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 TAB3Q8N5C8 712 aaPredicted RBP17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 CCHCR1Q8TD31 782 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 PCDHA13Q9Y5I0 950 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 MED7O43513 233 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 MOCS3O95396 460 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 PTPREP23469 700 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 MXI1P50539 228 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 COA1Q9GZY4 146 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 VCX3AQ9NNX9 186 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 UBE2TQ9NPD8 197 aaPredicted RBP17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 AKT3Q9Y243 479 aa17.92■□□□□ 0.46
PCDHA1-203ENST00000504120 USP31Q70CQ4 1352 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 STK36Q9NRP7 1315 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 GOLGA8CPA6NN73 597 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 SEC31AO94979 1220 aaKnown RBP17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 CCDC197Q8NCU1 140 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 SPATA31A3Q5VYP0 1347 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 GSTA1P08263 222 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 GSTA2P09210 222 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 OSBPP22059 807 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 TMTC3Q6ZXV5 915 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 RIPOR2Q9Y4F9 1068 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 NUB1Q9Y5A7 615 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 PNPLA6Q8IY17 1366 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 WDR19Q8NEZ3 1342 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 LRRIQ1Q96JM4 1722 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 UBE2SQ16763 222 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 PTPN21Q16825 1174 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 DPP9Q86TI2 863 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 TRIM42Q8IWZ5 723 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 MB21D1Q8N884 522 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 TACO1Q9BSH4 297 aaKnown RBP17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 CACYBPQ9HB71 228 aaKnown RBP17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 PLTPP55058 493 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 PDE1BQ01064 536 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 PLCB4Q15147 1175 aa17.91■□□□□ 0.46
PCDHA1-203ENST00000504120 EVI5O60447 810 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 ZNF579Q8NAF0 562 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 FAN1Q9Y2M0 1017 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 FTCDO95954 541 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 RNASELQ05823 741 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 IFRD2Q12894 506 aaPredicted RBP17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 TOB2Q14106 344 aaPredicted RBP17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 SARM1Q6SZW1 724 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 PPRC1Q5VV67 1664 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 PSAPP07602 524 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms