RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 ASGR1P07306 291 aa12.63□□□□□ -0.39
VCAN-205ENST00000503923 COL6A1P12109 1028 aa12.63□□□□□ -0.39
VCAN-205ENST00000503923 U2AF2P26368 475 aaKnown RBP eCLIP12.63□□□□□ -0.39
VCAN-205ENST00000503923 ACLYP53396 1101 aa12.63□□□□□ -0.39
VCAN-205ENST00000503923 MCTP1Q6DN14 999 aa12.63□□□□□ -0.39
VCAN-205ENST00000503923 LENG9Q96B70 501 aa12.63□□□□□ -0.39
VCAN-205ENST00000503923 SPATA33Q96N06 139 aa12.63□□□□□ -0.39
VCAN-205ENST00000503923 ZNF577Q9BSK1 485 aa12.63□□□□□ -0.39
VCAN-205ENST00000503923 SENP6Q9GZR1 1112 aaPredicted RBP12.63□□□□□ -0.39
VCAN-205ENST00000503923 POLR3EQ9NVU0 708 aa12.63□□□□□ -0.39
VCAN-205ENST00000503923 PKD2L1Q9P0L9 805 aa12.63□□□□□ -0.39
VCAN-205ENST00000503923 DDX25Q9UHL0 483 aaKnown RBP12.63□□□□□ -0.39
VCAN-205ENST00000503923 NFASCO94856 1347 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 DOCK5Q9H7D0 1870 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 A0A1W2PQ45 241 aaPredicted RBP12.62□□□□□ -0.39
VCAN-205ENST00000503923 A0A1W2PQY0 241 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 KIF28PB7ZC32 967 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 IPO5O00410 1097 aaKnown RBP12.62□□□□□ -0.39
VCAN-205ENST00000503923 NOP56O00567 594 aaKnown RBP12.62□□□□□ -0.39
VCAN-205ENST00000503923 SORBS3O60504 671 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 CCNT1O60563 726 aaKnown RBP12.62□□□□□ -0.39
VCAN-205ENST00000503923 CABYRO75952 493 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 MMP3P08254 477 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 TRAPPC10P48553 1259 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 RGS19P49795 217 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 ITGB3BPQ13352 177 aaPredicted RBP12.62□□□□□ -0.39
VCAN-205ENST00000503923 DGKDQ16760 1214 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 HSDL1Q3SXM5 330 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 GLT1D1Q96MS3 346 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 BCAS3Q9H6U6 928 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 JPH1Q9HDC5 661 aaPredicted RBP12.62□□□□□ -0.39
VCAN-205ENST00000503923 SLC9A2Q9UBY0 812 aa12.62□□□□□ -0.39
VCAN-205ENST00000503923 NOL7Q9UMY1 257 aaKnown RBP12.62□□□□□ -0.39
VCAN-205ENST00000503923 VPS37CA5D8V6 355 aaPredicted RBP12.61□□□□□ -0.39
VCAN-205ENST00000503923 MSH4O15457 936 aa12.61□□□□□ -0.39
VCAN-205ENST00000503923 PPFIA4O75335 1185 aa12.61□□□□□ -0.39
VCAN-205ENST00000503923 MYL3P08590 195 aa12.61□□□□□ -0.39
VCAN-205ENST00000503923 HOXD8P13378 290 aaPredicted RBP12.61□□□□□ -0.39
VCAN-205ENST00000503923 SYT1P21579 422 aa12.61□□□□□ -0.39
VCAN-205ENST00000503923 PURAQ00577 322 aaKnown RBP12.61□□□□□ -0.39
VCAN-205ENST00000503923 CXCL17Q6UXB2 119 aa12.61□□□□□ -0.39
VCAN-205ENST00000503923 FERMT2Q96AC1 680 aa12.61□□□□□ -0.39
VCAN-205ENST00000503923 GPR20Q99678 358 aa12.61□□□□□ -0.39
VCAN-205ENST00000503923 MTG1Q9BT17 334 aaPredicted RBP12.61□□□□□ -0.39
VCAN-205ENST00000503923 STARD7Q9NQZ5 370 aa12.61□□□□□ -0.39
VCAN-205ENST00000503923 TBC1D22BQ9NU19 505 aa12.61□□□□□ -0.39
VCAN-205ENST00000503923 ELP1O95163 1332 aa12.61□□□□□ -0.39
VCAN-205ENST00000503923 TBX3O15119 743 aa12.6□□□□□ -0.39
VCAN-205ENST00000503923 DHX15O43143 795 aaKnown RBP12.6□□□□□ -0.39
VCAN-205ENST00000503923 SLC37A4O43826 429 aa12.6□□□□□ -0.39
VCAN-205ENST00000503923 PDIA4P13667 645 aaKnown RBP12.6□□□□□ -0.39
VCAN-205ENST00000503923 SP4Q02446 784 aa12.6□□□□□ -0.39
VCAN-205ENST00000503923 ORC2Q13416 577 aaPredicted RBP12.6□□□□□ -0.39
VCAN-205ENST00000503923 ETNPPLQ8TBG4 499 aa12.6□□□□□ -0.39
VCAN-205ENST00000503923 SEPT1Q8WYJ6 367 aa12.6□□□□□ -0.39
VCAN-205ENST00000503923 SLC5A5Q92911 643 aa12.6□□□□□ -0.39
VCAN-205ENST00000503923 VTI1AQ96AJ9 217 aa12.6□□□□□ -0.39
VCAN-205ENST00000503923 FAM20AQ96MK3 541 aa12.6□□□□□ -0.39
VCAN-205ENST00000503923 RIT2Q99578 217 aa12.6□□□□□ -0.39
VCAN-205ENST00000503923 HTATIP2Q9BUP3 242 aa12.6□□□□□ -0.39
VCAN-205ENST00000503923 TCEAL9Q9UHQ7 104 aa12.6□□□□□ -0.39
VCAN-205ENST00000503923 A0A0U1RQG5 324 aaPredicted RBP12.59□□□□□ -0.39
VCAN-205ENST00000503923 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
VCAN-205ENST00000503923 STX6O43752 255 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 MARCH6O60337 910 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 NEMFO60524 1076 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 GAS7O60861 476 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 ATP2B1P20020 1258 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 KRT76Q01546 638 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 RILPL1Q5EBL4 403 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 TTC38Q5R3I4 469 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 C1orf53Q5VUE5 145 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 LRCH2Q5VUJ6 765 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 ZNF746Q6NUN9 644 aaPredicted RBP12.59□□□□□ -0.39
VCAN-205ENST00000503923 SLC39A5Q6ZMH5 540 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 BRAPQ7Z569 592 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 SPRYD3Q8NCJ5 442 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 UIMC1Q96RL1 719 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 KATNAL1Q9BW62 490 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 TEKT3Q9BXF9 490 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 SEZ6LQ9BYH1 1024 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 KCNMB3Q9NPA1 279 aa12.59□□□□□ -0.39
VCAN-205ENST00000503923 GSTTP1A0A1W2PQM5 241 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 WNT7AO00755 349 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 PSMD10O75832 226 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
VCAN-205ENST00000503923 CCNE2O96020 404 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 F2P00734 622 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 LGALS2P05162 132 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 ZNF286BP0CG31 522 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 MCM7P33993 719 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 TCF7P36402 384 aaPredicted RBP12.58□□□□□ -0.4
VCAN-205ENST00000503923 TOB1P50616 345 aaPredicted RBP12.58□□□□□ -0.4
VCAN-205ENST00000503923 ATN1P54259 1190 aaPredicted RBP12.58□□□□□ -0.4
VCAN-205ENST00000503923 ACTR2P61160 394 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 SNX17Q15036 470 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 CALCRLQ16602 461 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
VCAN-205ENST00000503923 SMAP1Q8IYB5 467 aaPredicted RBP12.58□□□□□ -0.4
VCAN-205ENST00000503923 SLFN12Q8IYM2 578 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms