RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 C5orf42Q9H799 3197 aa13.99□□□□□ -0.17
THBS3-209ENST00000498500 ZNF318Q5VUA4 2279 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 SORBS3O60504 671 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 PLEKHG4Q58EX7 1191 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 HFE2Q6ZVN8 426 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 CYB5R4Q7L1T6 521 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 FBXO11Q86XK2 927 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 DGKHQ86XP1 1220 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 ADHFE1Q8IWW8 467 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 SEPT8Q92599 483 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 ANKS1AQ92625 1134 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 MAP4K1Q92918 833 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 KRT23Q9C075 422 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 CNNM2Q9H8M5 875 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 ZSWIM5Q9P217 1185 aa13.98□□□□□ -0.17
THBS3-209ENST00000498500 RBM8AQ9Y5S9 174 aaKnown RBP13.98□□□□□ -0.17
THBS3-209ENST00000498500 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 DHX16O60231 1041 aaKnown RBP13.97□□□□□ -0.17
THBS3-209ENST00000498500 PPFIA4O75335 1185 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 CFBP00751 764 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 NR3C2P08235 984 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 MYCLP12524 364 aaPredicted RBP13.97□□□□□ -0.17
THBS3-209ENST00000498500 IRS1P35568 1242 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
THBS3-209ENST00000498500 HIC1Q14526 733 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 SEC23AQ15436 765 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 SERINC5Q86VE9 423 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 IQCA1Q86XH1 822 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 ADGRF4Q8IZF3 695 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 ATP6V0A1Q93050 837 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 TOP1MTQ969P6 601 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 MFSD14AQ96MC6 490 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 SPATA33Q96N06 139 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 ZSCAN10Q96SZ4 725 aaPredicted RBP13.97□□□□□ -0.17
THBS3-209ENST00000498500 PXMP2Q9NR77 195 aa13.97□□□□□ -0.17
THBS3-209ENST00000498500 MRPL11Q9Y3B7 192 aaKnown RBP13.97□□□□□ -0.17
THBS3-209ENST00000498500 DOCK5Q9H7D0 1870 aa13.96□□□□□ -0.17
THBS3-209ENST00000498500 C17orf102A2RUQ5 167 aa13.96□□□□□ -0.17
THBS3-209ENST00000498500 NCK2O43639 380 aa13.96□□□□□ -0.17
THBS3-209ENST00000498500 CLUL1Q15846 466 aa13.96□□□□□ -0.17
THBS3-209ENST00000498500 MYSM1Q5VVJ2 828 aa13.96□□□□□ -0.17
THBS3-209ENST00000498500 RPAINQ86UA6 219 aa13.96□□□□□ -0.17
THBS3-209ENST00000498500 PNMA1Q8ND90 353 aa13.96□□□□□ -0.17
THBS3-209ENST00000498500 IFIH1Q9BYX4 1025 aaKnown RBP13.96□□□□□ -0.17
THBS3-209ENST00000498500 VAT1LQ9HCJ6 419 aa13.96□□□□□ -0.17
THBS3-209ENST00000498500 E7EWF7 191 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 GGPS1O95749 300 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 CTSHP09668 335 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 HOXD8P13378 290 aaPredicted RBP13.95□□□□□ -0.18
THBS3-209ENST00000498500 CTNNB1P35222 781 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 LTBRP36941 435 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 ANTXR2P58335 489 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 COL9A3Q14050 684 aaPredicted RBP13.95□□□□□ -0.18
THBS3-209ENST00000498500 COL19A1Q14993 1142 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 QRICH1Q2TAL8 776 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 HSDL1Q3SXM5 330 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 CCDC178Q5BJE1 867 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 CELF3Q5SZQ8 465 aaKnown RBP13.95□□□□□ -0.18
THBS3-209ENST00000498500 KCNV1Q6PIU1 500 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 MB21D2Q8IYB1 491 aaPredicted RBP13.95□□□□□ -0.18
THBS3-209ENST00000498500 POP1Q99575 1024 aaKnown RBP13.95□□□□□ -0.18
THBS3-209ENST00000498500 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 MUTYHQ9UIF7 546 aa13.95□□□□□ -0.18
THBS3-209ENST00000498500 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.94□□□□□ -0.18
THBS3-209ENST00000498500 H3BRB1 525 aa13.94□□□□□ -0.18
THBS3-209ENST00000498500 CDC45O75419 566 aa13.94□□□□□ -0.18
THBS3-209ENST00000498500 SMAD2Q15796 467 aaKnown RBP13.94□□□□□ -0.18
THBS3-209ENST00000498500 FIBCD1Q8N539 461 aa13.94□□□□□ -0.18
THBS3-209ENST00000498500 IL17RAQ96F46 866 aa13.94□□□□□ -0.18
THBS3-209ENST00000498500 SNX27Q96L92 541 aa13.94□□□□□ -0.18
THBS3-209ENST00000498500 UBAC1Q9BSL1 405 aa13.94□□□□□ -0.18
THBS3-209ENST00000498500 C16orf70Q9BSU1 422 aa13.94□□□□□ -0.18
THBS3-209ENST00000498500 TUT1Q9H6E5 874 aaKnown RBP13.94□□□□□ -0.18
THBS3-209ENST00000498500 MLXIPQ9HAP2 919 aa13.94□□□□□ -0.18
THBS3-209ENST00000498500 SENP2Q9HC62 589 aa13.94□□□□□ -0.18
THBS3-209ENST00000498500 COL4A6Q14031 1691 aa13.94□□□□□ -0.18
THBS3-209ENST00000498500 TRIOO75962 3097 aa13.94□□□□□ -0.18
THBS3-209ENST00000498500 TECTAO75443 2155 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 SLC27A2O14975 620 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 TREHO43280 583 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 MBTPS2O43462 519 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 RGS20O76081 388 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 CENPBP07199 599 aaPredicted RBP13.93□□□□□ -0.18
THBS3-209ENST00000498500 SMIM10L2AP0DMW4 78 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 SMIM10L2BP0DMW5 78 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 DLX2Q07687 328 aaPredicted RBP13.93□□□□□ -0.18
THBS3-209ENST00000498500 ASPRV1Q53RT3 343 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 HERC4Q5GLZ8 1057 aaPredicted RBP13.93□□□□□ -0.18
THBS3-209ENST00000498500 RNF135Q8IUD6 432 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 APBB2Q92870 758 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 PDCD2LQ9BRP1 358 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 OSBPL7Q9BZF2 842 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 RNPEPQ9H4A4 650 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 IGFLR1Q9H665 355 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 ANO2Q9NQ90 1003 aa13.93□□□□□ -0.18
THBS3-209ENST00000498500 CAND2O75155 1236 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 CSPG5O95196 566 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 RB1P06400 928 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 PARP1P09874 1014 aaKnown RBP13.92□□□□□ -0.18
THBS3-209ENST00000498500 HSD17B4P51659 736 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms