RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 LIMCH1Q9UPQ0 1083 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 GTF3C3Q9Y5Q9 886 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 MEIS1O00470 390 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 CTDNEP1O95476 244 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 CYP3A4P08684 503 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 ZNF286BP0CG31 522 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 ARP10275 920 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 HOXD8P13378 290 aaPredicted RBP14.59□□□□□ -0.07
HSPG2-213ENST00000498495 KCNA2P16389 499 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 MFSD10Q14728 455 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 KIAA0753Q2KHM9 967 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 GALNT17Q6IS24 598 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 MFSD5Q6N075 450 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 TDHQ8IZJ6 230 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 FAM177A1Q8N128 213 aaPredicted RBP14.59□□□□□ -0.07
HSPG2-213ENST00000498495 C7orf31Q8N865 590 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 RASGRP4Q8TDF6 673 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 WASF1Q92558 559 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 GTF3C6Q969F1 213 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 AIFM3Q96NN9 605 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 KIF2CQ99661 725 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 GPR20Q99678 358 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 ORC3Q9UBD5 711 aaPredicted RBP14.59□□□□□ -0.07
HSPG2-213ENST00000498495 NOD1Q9Y239 953 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 STK36Q9NRP7 1315 aa14.59□□□□□ -0.07
HSPG2-213ENST00000498495 H3BRB1 525 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 HAS3O00219 553 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 DTNBO60941 627 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 LARGE1O95461 756 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 F2P00734 622 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 FPGSQ05932 587 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 UTP14CQ5TAP6 766 aaKnown RBP14.58□□□□□ -0.08
HSPG2-213ENST00000498495 SESTD1Q86VW0 696 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 PLA2G4DQ86XP0 818 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 BLIDQ8IZY5 108 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 TMEM199Q8N511 208 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 SEPT1Q8WYJ6 367 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 SDF4Q9BRK5 362 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 C16orf70Q9BSU1 422 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 HIPK3Q9H422 1215 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 TUT1Q9H6E5 874 aaKnown RBP14.58□□□□□ -0.08
HSPG2-213ENST00000498495 HDAC6Q9UBN7 1215 aa14.58□□□□□ -0.08
HSPG2-213ENST00000498495 FAM86B1E9PN63 330 aa14.57□□□□□ -0.08
HSPG2-213ENST00000498495 LGALS2P05162 132 aa14.57□□□□□ -0.08
HSPG2-213ENST00000498495 FAM86B2P0C5J1 330 aa14.57□□□□□ -0.08
HSPG2-213ENST00000498495 CYP2C9P11712 490 aa14.57□□□□□ -0.08
HSPG2-213ENST00000498495 CYP2C18P33260 490 aa14.57□□□□□ -0.08
HSPG2-213ENST00000498495 USP11P51784 963 aa14.57□□□□□ -0.08
HSPG2-213ENST00000498495 PTGISQ16647 500 aa14.57□□□□□ -0.08
HSPG2-213ENST00000498495 NIPA1Q7RTP0 329 aa14.57□□□□□ -0.08
HSPG2-213ENST00000498495 CRYGNQ8WXF5 182 aa14.57□□□□□ -0.08
HSPG2-213ENST00000498495 ZSCAN31Q96LW9 406 aaPredicted RBP14.57□□□□□ -0.08
HSPG2-213ENST00000498495 AGO4Q9HCK5 861 aaKnown RBP14.57□□□□□ -0.08
HSPG2-213ENST00000498495 GTF2IRD1Q9UHL9 959 aa14.57□□□□□ -0.08
HSPG2-213ENST00000498495 KCNJ14Q9UNX9 436 aa14.57□□□□□ -0.08
HSPG2-213ENST00000498495 GSTTP1A0A1W2PQM5 241 aa14.56□□□□□ -0.08
HSPG2-213ENST00000498495 FDPSP14324 419 aaKnown RBP14.56□□□□□ -0.08
HSPG2-213ENST00000498495 TCF7P36402 384 aaPredicted RBP14.56□□□□□ -0.08
HSPG2-213ENST00000498495 PPIGQ13427 754 aaKnown RBP eCLIP14.56□□□□□ -0.08
HSPG2-213ENST00000498495 RABEP1Q15276 862 aa14.56□□□□□ -0.08
HSPG2-213ENST00000498495 GDF6Q6KF10 455 aaPredicted RBP14.56□□□□□ -0.08
HSPG2-213ENST00000498495 RETREG2Q8NC44 543 aa14.56□□□□□ -0.08
HSPG2-213ENST00000498495 DAGLBQ8NCG7 672 aa14.56□□□□□ -0.08
HSPG2-213ENST00000498495 NOC4LQ9BVI4 516 aaKnown RBP14.56□□□□□ -0.08
HSPG2-213ENST00000498495 JPH1Q9HDC5 661 aaPredicted RBP14.56□□□□□ -0.08
HSPG2-213ENST00000498495 SLC9A2Q9UBY0 812 aa14.56□□□□□ -0.08
HSPG2-213ENST00000498495 ZNF215Q9UL58 517 aaPredicted RBP14.56□□□□□ -0.08
HSPG2-213ENST00000498495 TELO2Q9Y4R8 837 aa14.56□□□□□ -0.08
HSPG2-213ENST00000498495 SCN10AQ9Y5Y9 1956 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 CSF2RAP15509 400 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 CIITAP33076 1130 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 CCL23P55773 120 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 BFSP2Q13515 415 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 SHHQ15465 462 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 PRR16Q569H4 304 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 NSUN7Q8NE18 718 aaKnown RBP14.55□□□□□ -0.08
HSPG2-213ENST00000498495 IL27Q8NEV9 243 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 TBCKQ8TEA7 893 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 GLG1Q92896 1179 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 ZNF577Q9BSK1 485 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 PHF20Q9BVI0 1012 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 GJB4Q9NTQ9 266 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 NFASCO94856 1347 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 UMODL1Q5DID0 1318 aa14.55□□□□□ -0.08
HSPG2-213ENST00000498495 DNAH12Q6ZR08 3092 aa14.54□□□□□ -0.08
HSPG2-213ENST00000498495 IGLV3-22A0A075B6J6 115 aa14.54□□□□□ -0.08
HSPG2-213ENST00000498495 M0R2N6 131 aa14.54□□□□□ -0.08
HSPG2-213ENST00000498495 DDX39AO00148 427 aaKnown RBP14.54□□□□□ -0.08
HSPG2-213ENST00000498495 IPO5O00410 1097 aaKnown RBP14.54□□□□□ -0.08
HSPG2-213ENST00000498495 ST18O60284 1047 aa14.54□□□□□ -0.08
HSPG2-213ENST00000498495 FXR1P51114 621 aaKnown RBP eCLIP14.54□□□□□ -0.08
HSPG2-213ENST00000498495 EPHB4P54760 987 aa14.54□□□□□ -0.08
HSPG2-213ENST00000498495 SETQ01105 290 aaPredicted RBP14.54□□□□□ -0.08
HSPG2-213ENST00000498495 NONOQ15233 471 aaKnown RBP eCLIP14.54□□□□□ -0.08
HSPG2-213ENST00000498495 KRT25Q7Z3Z0 450 aa14.54□□□□□ -0.08
HSPG2-213ENST00000498495 CCDC83Q8IWF9 413 aa14.54□□□□□ -0.08
HSPG2-213ENST00000498495 RPUSD2Q8IZ73 545 aaKnown RBP14.54□□□□□ -0.08
HSPG2-213ENST00000498495 CCDC155Q8N6L0 562 aa14.54□□□□□ -0.08
HSPG2-213ENST00000498495 RNPEPQ9H4A4 650 aa14.54□□□□□ -0.08
HSPG2-213ENST00000498495 SMARCAD1Q9H4L7 1026 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms