RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 MYRIPQ8NFW9 859 aa10.36□□□□□ -0.75
SNX13-212ENST00000498463 PIWIL2Q8TC59 973 aaKnown RBP10.36□□□□□ -0.75
SNX13-212ENST00000498463 PARD3BQ8TEW8 1205 aa10.36□□□□□ -0.75
SNX13-212ENST00000498463 NAP1L4Q99733 375 aaKnown RBP10.36□□□□□ -0.75
SNX13-212ENST00000498463 PLVAPQ9BX97 442 aa10.36□□□□□ -0.75
SNX13-212ENST00000498463 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.36□□□□□ -0.75
SNX13-212ENST00000498463 ZDHHC5Q9C0B5 715 aa10.36□□□□□ -0.75
SNX13-212ENST00000498463 AKTIPQ9H8T0 292 aa10.36□□□□□ -0.75
SNX13-212ENST00000498463 PLCB1Q9NQ66 1216 aa10.36□□□□□ -0.75
SNX13-212ENST00000498463 TOMM22Q9NS69 142 aa10.36□□□□□ -0.75
SNX13-212ENST00000498463 KLHL11Q9NVR0 708 aa10.36□□□□□ -0.75
SNX13-212ENST00000498463 A6NNZ2 444 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 DVL2O14641 736 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 KDM1AO60341 852 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 KRT15P19012 456 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 JAM2P57087 298 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 LSAMPQ13449 338 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 PDCD1Q15116 288 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 FSTL4Q6MZW2 842 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 SHISA2Q6UWI4 295 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 LYPD4Q6UWN0 246 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 CATIPQ7Z7H3 387 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 OSTM1Q86WC4 334 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 JADE3Q92613 823 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 FAM46AQ96IP4 442 aaKnown RBP10.35□□□□□ -0.75
SNX13-212ENST00000498463 CHAMP1Q96JM3 812 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 GPR62Q9BZJ7 368 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 PCIF1Q9H4Z3 704 aa10.35□□□□□ -0.75
SNX13-212ENST00000498463 TBX3O15119 743 aa10.34□□□□□ -0.75
SNX13-212ENST00000498463 FGF10O15520 208 aaPredicted RBP10.34□□□□□ -0.75
SNX13-212ENST00000498463 ZNF865P0CJ78 1059 aaPredicted RBP10.34□□□□□ -0.75
SNX13-212ENST00000498463 ANO1Q5XXA6 986 aa10.34□□□□□ -0.75
SNX13-212ENST00000498463 HHIPL2Q6UWX4 724 aa10.34□□□□□ -0.75
SNX13-212ENST00000498463 FAM214BQ7L5A3 538 aa10.34□□□□□ -0.75
SNX13-212ENST00000498463 CPNE8Q86YQ8 564 aa10.34□□□□□ -0.75
SNX13-212ENST00000498463 FAM43AQ8N2R8 423 aa10.34□□□□□ -0.75
SNX13-212ENST00000498463 TGFBRAP1Q8WUH2 860 aa10.34□□□□□ -0.75
SNX13-212ENST00000498463 PTCHD1Q96NR3 888 aa10.34□□□□□ -0.75
SNX13-212ENST00000498463 RNF38Q9H0F5 515 aa10.34□□□□□ -0.75
SNX13-212ENST00000498463 TIMM13Q9Y5L4 95 aaPredicted RBP10.34□□□□□ -0.75
SNX13-212ENST00000498463 CAPN6Q9Y6Q1 641 aa10.34□□□□□ -0.75
SNX13-212ENST00000498463 LCHNA4D1U4 455 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 NPHP1O15259 732 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 AMY2AP04746 511 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 SYPP08247 313 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 FAM87AP0C7U9 286 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 SRFP11831 508 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 AMY2BP19961 511 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 TTLL7Q6ZT98 887 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 IFNL2Q8IZJ0 200 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 MFSD4AQ8N468 514 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 ORAI2Q96SN7 254 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 CSRNP2Q9H175 543 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 NLRC4Q9NPP4 1024 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 CLDND1Q9NY35 253 aa10.33□□□□□ -0.76
SNX13-212ENST00000498463 KCNK3O14649 394 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 TPP1O14773 563 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 MYL3P08590 195 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 MYBP10242 640 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 RXRBP28702 533 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 BCL6P41182 706 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 RPL11P62913 178 aaKnown RBP10.32□□□□□ -0.76
SNX13-212ENST00000498463 LAPTM5Q13571 262 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 GPR19Q15760 415 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 XRRA1Q6P2D8 792 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 ZBTB34Q8NCN2 500 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 TNIP3Q96KP6 325 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 UBL7Q96S82 380 aaPredicted RBP10.32□□□□□ -0.76
SNX13-212ENST00000498463 JAM3Q9BX67 310 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 AP5S1Q9NUS5 200 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 DNAJC28Q9NX36 388 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 PCDHA11Q9Y5I1 949 aa10.32□□□□□ -0.76
SNX13-212ENST00000498463 FAM95CA0A1B0GW59 222 aa10.31□□□□□ -0.76
SNX13-212ENST00000498463 MAP4P27816 1152 aaKnown RBP10.31□□□□□ -0.76
SNX13-212ENST00000498463 KIF11P52732 1056 aa10.31□□□□□ -0.76
SNX13-212ENST00000498463 PCBP3P57721 371 aaKnown RBP10.31□□□□□ -0.76
SNX13-212ENST00000498463 ATAT1Q5SQI0 421 aa10.31□□□□□ -0.76
SNX13-212ENST00000498463 ANGEL2Q5VTE6 544 aaKnown RBP10.31□□□□□ -0.76
SNX13-212ENST00000498463 SRLQ86TD4 932 aa10.31□□□□□ -0.76
SNX13-212ENST00000498463 NLRP10Q86W26 655 aa10.31□□□□□ -0.76
SNX13-212ENST00000498463 PTRH1Q86Y79 214 aaKnown RBP10.31□□□□□ -0.76
SNX13-212ENST00000498463 NOSTRINQ8IVI9 506 aa10.31□□□□□ -0.76
SNX13-212ENST00000498463 LINC00116Q8NCU8 138 aa10.31□□□□□ -0.76
SNX13-212ENST00000498463 HEXIM2Q96MH2 286 aaKnown RBP10.31□□□□□ -0.76
SNX13-212ENST00000498463 FAM193BQ96PV7 902 aaPredicted RBP10.31□□□□□ -0.76
SNX13-212ENST00000498463 DUSP15Q9H1R2 295 aaPredicted RBP10.31□□□□□ -0.76
SNX13-212ENST00000498463 CASS4Q9NQ75 786 aa10.31□□□□□ -0.76
SNX13-212ENST00000498463 GTF2IRD1Q9UHL9 959 aa10.31□□□□□ -0.76
SNX13-212ENST00000498463 DMTF1Q9Y222 760 aa10.31□□□□□ -0.76
SNX13-212ENST00000498463 KLRG2A4D1S0 409 aaPredicted RBP10.3□□□□□ -0.76
SNX13-212ENST00000498463 LCE2BO14633 110 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 CENPBP07199 599 aaPredicted RBP10.3□□□□□ -0.76
SNX13-212ENST00000498463 GNAT1P11488 350 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 GTF2A2P52657 109 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 AK2P54819 239 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 STK3Q13188 491 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 ESRP1Q6NXG1 681 aaKnown RBP10.3□□□□□ -0.76
SNX13-212ENST00000498463 LILRA6Q6PI73 481 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 C1orf228Q6PIY5 440 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms