RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 ZMYND12Q9H0C1 365 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 PANK4Q9NVE7 773 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 LEMD3Q9Y2U8 911 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 PXDNLA1KZ92 1463 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 CYP2D7A0A087X1C5 515 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 COBLO75128 1261 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 ECEL1O95672 775 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 GYS2P54840 703 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 SLC12A2P55011 1212 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 GPBP1Q86WP2 473 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 SMYD4Q8IYR2 804 aaPredicted RBP16.3■□□□□ 0.2
C4A-259ENST00000498271 ANKRD13CQ8N6S4 541 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 UHMK1Q8TAS1 419 aaKnown RBP16.3■□□□□ 0.2
C4A-259ENST00000498271 ALDH8A1Q9H2A2 487 aaPredicted RBP16.3■□□□□ 0.2
C4A-259ENST00000498271 CD2APQ9Y5K6 639 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 TTC4O95801 387 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 DLGAP5Q15398 846 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 FAM26FQ5R3K3 315 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 CAPRIN2Q6IMN6 1127 aaKnown RBP16.3■□□□□ 0.2
C4A-259ENST00000498271 TRIM11Q96F44 468 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 KLC4Q9NSK0 619 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 PCDHA13Q9Y5I0 950 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 DDX39AO00148 427 aaKnown RBP16.3■□□□□ 0.2
C4A-259ENST00000498271 PRPF3O43395 683 aaKnown RBP16.3■□□□□ 0.2
C4A-259ENST00000498271 IFNB1P01574 187 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 GGCXP38435 758 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 GARSP41250 739 aaKnown RBP16.3■□□□□ 0.2
C4A-259ENST00000498271 PLTPP55058 493 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 ADAM9Q13443 819 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 PPP1R2P3Q6NXS1 205 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 SYNE4Q8N205 404 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 LRGUKQ96M69 825 aa16.3■□□□□ 0.2
C4A-259ENST00000498271 SRPRBQ9Y5M8 271 aaKnown RBP16.3■□□□□ 0.2
C4A-259ENST00000498271 FOXO4P98177 505 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 CERKQ8TCT0 537 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 SLC39A2Q9NP94 309 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 PACSIN2Q9UNF0 486 aaPredicted RBP16.29■□□□□ 0.2
C4A-259ENST00000498271 CHGBP05060 677 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 TMED1Q13445 227 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 MRFAP1Q9Y605 127 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 PPIP5K2O43314 1243 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 SERPING1P05155 500 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 INHBAP08476 426 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 PDCD2Q16342 344 aaPredicted RBP16.29■□□□□ 0.2
C4A-259ENST00000498271 SMCR8Q8TEV9 937 aaPredicted RBP16.29■□□□□ 0.2
C4A-259ENST00000498271 PLAAQ9Y263 795 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 SCNN1DP51172 638 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 RPS6KA2Q15349 733 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 CDAN1Q8IWY9 1227 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 OLFM3Q96PB7 478 aa16.29■□□□□ 0.2
C4A-259ENST00000498271 KCNQ4P56696 695 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 BFSP1Q12934 665 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 TSGA10IPQ3SY00 556 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 CDKL2Q92772 493 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 CXorf56Q9H5V9 222 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 DDX25Q9UHL0 483 aaKnown RBP16.28■□□□□ 0.2
C4A-259ENST00000498271 DAPK3O43293 454 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 ZSCAN20P17040 1043 aaPredicted RBP16.28■□□□□ 0.2
C4A-259ENST00000498271 MB21D2Q8IYB1 491 aaPredicted RBP16.28■□□□□ 0.2
C4A-259ENST00000498271 SLFN12Q8IYM2 578 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 TADA3O75528 432 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 MOCS3O95396 460 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 RABL6Q3YEC7 729 aaPredicted RBP16.28■□□□□ 0.2
C4A-259ENST00000498271 NLRP14Q86W24 1093 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 GFM2Q969S9 779 aaKnown RBP16.28■□□□□ 0.2
C4A-259ENST00000498271 ISCA1Q9BUE6 129 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 XAB2Q9HCS7 855 aaKnown RBP16.28■□□□□ 0.2
C4A-259ENST00000498271 NEDD4P46934 1319 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 RASSF10A6NK89 507 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 SATB1Q01826 763 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 TMEM60Q9H2L4 133 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 GOLPH3LQ9H4A5 285 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 SLC24A3Q9HC58 644 aa16.28■□□□□ 0.2
C4A-259ENST00000498271 NBPF26B4DH59 902 aa16.27■□□□□ 0.2
C4A-259ENST00000498271 CTIFO43310 598 aaKnown RBP16.27■□□□□ 0.2
C4A-259ENST00000498271 CYB5R4Q7L1T6 521 aa16.27■□□□□ 0.2
C4A-259ENST00000498271 NBPF15Q8N660 670 aa16.27■□□□□ 0.2
C4A-259ENST00000498271 CALR3Q96L12 384 aaKnown RBP16.27■□□□□ 0.2
C4A-259ENST00000498271 SAMSN1Q9NSI8 373 aaKnown RBP16.27■□□□□ 0.2
C4A-259ENST00000498271 STK17AQ9UEE5 414 aa16.27■□□□□ 0.2
C4A-259ENST00000498271 CDHR2Q9BYE9 1310 aa16.27■□□□□ 0.2
C4A-259ENST00000498271 RPAP1Q9BWH6 1393 aaPredicted RBP16.27■□□□□ 0.2
C4A-259ENST00000498271 MMEP08473 750 aa16.27■□□□□ 0.2
C4A-259ENST00000498271 ESRRAP11474 423 aaPredicted RBP16.27■□□□□ 0.2
C4A-259ENST00000498271 ASPHQ12797 758 aa16.27■□□□□ 0.2
C4A-259ENST00000498271 TNS3Q68CZ2 1445 aa16.27■□□□□ 0.2
C4A-259ENST00000498271 SERPINI1Q99574 410 aa16.27■□□□□ 0.2
C4A-259ENST00000498271 ZNF148Q9UQR1 794 aa16.27■□□□□ 0.2
C4A-259ENST00000498271 COL4A3BPQ9Y5P4 624 aa16.27■□□□□ 0.2
C4A-259ENST00000498271 YIPF3Q9GZM5 350 aa16.27■□□□□ 0.19
C4A-259ENST00000498271 MIS12Q9H081 205 aa16.27■□□□□ 0.19
C4A-259ENST00000498271 NFU1Q9UMS0 254 aa16.27■□□□□ 0.19
C4A-259ENST00000498271 NR1H3Q13133 447 aa16.27■□□□□ 0.19
C4A-259ENST00000498271 DOK7Q18PE1 504 aa16.27■□□□□ 0.19
C4A-259ENST00000498271 TPH2Q8IWU9 490 aa16.27■□□□□ 0.19
C4A-259ENST00000498271 HACE1Q8IYU2 909 aa16.27■□□□□ 0.19
C4A-259ENST00000498271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.27■□□□□ 0.193e-11■■■■■ 53.8
C4A-259ENST00000498271 SUFUQ9UMX1 484 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms