RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ALDH1B1P30837 517 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 MTHFSP49914 203 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 LMNB2Q03252 620 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 SART3Q15020 963 aaKnown RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 STK38Q15208 465 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 TLR1Q15399 786 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 EDRF1Q3B7T1 1238 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 FAM153CQ494X1 144 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 HERC4Q5GLZ8 1057 aaPredicted RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 CCNJQ5T5M9 372 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 JMJD6Q6NYC1 403 aaPredicted RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 SRGAP1Q7Z6B7 1085 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ADGRF4Q8IZF3 695 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 TTC5Q8N0Z6 440 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ENGASEQ8NFI3 743 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 CAPNS2Q96L46 248 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 RNF5Q99942 180 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 SELENOOQ9BVL4 669 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 DPCDQ9BVM2 203 aaPredicted RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 UBE2OQ9C0C9 1292 aaKnown RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 KDM4CQ9H3R0 1056 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 SEMA4AQ9H3S1 761 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 TMEM74BQ9NUR3 256 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 TCEAL9Q9UHQ7 104 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 KCNH4Q9UQ05 1017 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 JRKLQ9Y4A0 524 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 NUB1Q9Y5A7 615 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 C1orf167Q5SNV9 1468 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 UBR1Q8IWV7 1749 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 MACROD2A1Z1Q3 448 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 HIP1O00291 1037 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 KIAA0355O15063 1070 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 POLR1CO15160 346 aaPredicted RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 ANP32CO43423 234 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 MFN2O95140 757 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 TP53P04637 393 aaPredicted RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 ZNF806P0C7X5 589 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 EBLN1P0CF75 366 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 PRB4P10163 310 aaPredicted RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 SNRPBP14678 240 aaKnown RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 AKT1P31749 480 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 AFF3P51826 1226 aaKnown RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 NOGQ13253 232 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 NAA25Q14CX7 972 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 NOL9Q5SY16 702 aaKnown RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 HIBCHQ6NVY1 386 aaPredicted RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 ZNF343Q6P1L6 599 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 FBXO38Q6PIJ6 1188 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 APOA5Q6Q788 366 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 TAF8Q7Z7C8 310 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 CCDC117Q8IWD4 279 aaPredicted RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 PHACTR4Q8IZ21 702 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 MAGEB6Q8N7X4 407 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 TMEM102Q8N9M5 508 aaPredicted RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 SERAC1Q96JX3 654 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 DCLRE1CQ96SD1 692 aaKnown RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 KRTAP4-5Q9BYR2 181 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 CEP41Q9BYV8 373 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 OSBPL6Q9BZF3 934 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 RABEP2Q9H5N1 569 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 CLMPQ9H6B4 373 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ATG3Q9NT62 314 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 SERGEFQ9UGK8 458 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 MCM8Q9UJA3 840 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 MGAT4BQ9UQ53 548 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ANKRD30BQ9BXX2 1392 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ARFGEF1Q9Y6D6 1849 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 SPTBN2O15020 2390 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 DOCK9Q9BZ29 2069 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 SLC35F4A4IF30 521 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 XPOTO43592 962 aaKnown RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 RAB11FIP3O75154 756 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ZNF432O94892 652 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 GHRHP01286 108 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 PRSS56P0CW18 603 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 CYP2D6P10635 497 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 INSRRP14616 1297 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 CPB1P15086 417 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 DPEP1P16444 411 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ABCB4P21439 1286 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 FGFR3P22607 806 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 RFC5P40937 340 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ASMTP46597 345 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 KCNJ4P48050 445 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 PCBP4P57723 403 aaKnown RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 ZNF91Q05481 1191 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ALDH1L2Q3SY69 923 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ZNF260Q3ZCT1 412 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 BRDTQ58F21 947 aaPredicted RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 NUP93Q8N1F7 819 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ARHGAP45Q92619 1136 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ARL8AQ96BM9 186 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 RAB3CQ96E17 227 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 ASIC4Q96FT7 647 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 INTS4Q96HW7 963 aaKnown RBP1.65□□□□□ -2.15
XRN1-214ENST00000498077 PLEKHG4BQ96PX9 1271 aa1.65□□□□□ -2.15
XRN1-214ENST00000498077 LMTK2Q8IWU2 1503 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CEP290O15078 2479 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 MAP1BP46821 2468 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 CACNA1DQ01668 2161 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms