RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 GREM2Q9H772 168 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 OSGEPQ9NPF4 335 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 GPRC5DQ9NZD1 345 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 ZMYM5Q9UJ78 669 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 HACL1Q9UJ83 578 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 MINPP1Q9UNW1 487 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 CDK5RAP2Q96SN8 1893 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 FOCADQ5VW36 1801 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 OTOFQ9HC10 1997 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 MYO5AQ9Y4I1 1855 aaKnown RBP7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 DOCK2Q92608 1830 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 FAM229AH3BQW9 127 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 DEAF1O75398 565 aaPredicted RBP7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 GJB6O95452 261 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 ITPKAP23677 461 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 EPHX2P34913 555 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 GRIA4P48058 902 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 FOXD4Q12950 439 aaPredicted RBP7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 LONRF2Q1L5Z9 754 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 USP50Q70EL3 339 aaPredicted RBP7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 VN1R5Q7Z5H4 357 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 DNAJC5GQ8N7S2 189 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 SLC39A13Q96H72 371 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 USP44Q9H0E7 712 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 AKAP2Q9Y2D5 859 aa7.11□□□□□ -1.27
TMEM39A-212ENST00000497993 MAST2Q6P0Q8 1798 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 MYH7P12883 1935 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 CCDC163A0A0D9SF12 145 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 SHTN1A0MZ66 631 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 KRBA1A5PL33 1030 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 C9orf172C9J069 976 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 DLL1O00548 723 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 FSCN2O14926 492 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 DDAH1O94760 285 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 HSP90AA1P07900 732 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 MCM4P33991 863 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 IGHMBP2P38935 993 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 ARL4DP49703 201 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 CCT4P50991 539 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 GUCY2FP51841 1108 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 FKBP1AP62942 108 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 MTX1Q13505 466 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 IKBKEQ14164 716 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 TNIP1Q15025 636 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 EPHA10Q5JZY3 1008 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 INTS3Q68E01 1043 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 CIAPIN1Q6FI81 312 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 IGF2-ASQ6U949 168 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 DTHD1Q6ZMT9 781 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 CCDC84Q86UT8 332 aaPredicted RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 C16orf71Q8IYS4 520 aaPredicted RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 ANKRD44Q8N8A2 993 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 GLIS3Q8NEA6 775 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 AGBL3Q8NEM8 1001 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 ARPC5LQ9BPX5 153 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 FAM126AQ9BYI3 521 aaPredicted RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 API5Q9BZZ5 524 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 ANKRD2Q9GZV1 360 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 CLEC4MQ9H2X3 399 aaPredicted RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 SOX17Q9H6I2 414 aaPredicted RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 ABCB6Q9NP58 842 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 ADARB2Q9NS39 739 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 SWAP70Q9UH65 585 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 MAPRE3Q9UPY8 281 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 TLR6Q9Y2C9 796 aa7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 COL1A1P02452 1464 aaPredicted RBP7.1□□□□□ -1.27
TMEM39A-212ENST00000497993 MYO3BQ8WXR4 1341 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 A0A087X0B3 334 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 A0A0U1RQG5 324 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 E2F8A0AVK6 867 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 ANKRD18BA2A2Z9 1011 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 GOLGA6CA6NDK9 693 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 GOLGA6BA6NDN3 693 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 METTL12A8MUP2 240 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 ECE2O60344 883 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 RFPL3O75679 317 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 UFL1O94874 794 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 BPNT1O95861 308 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 NBPF7P0C2Y1 421 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 GOLGA6DP0CG33 693 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 ZNF280AP59817 542 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 NRG1Q02297 640 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 IFIT5Q13325 482 aaKnown RBP7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 GRIK4Q16099 956 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 C21orf62-AS1Q17RA5 79 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 SPRED3Q2MJR0 410 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 RPS26P11Q5JNZ5 115 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 WDR78Q5VTH9 848 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 SPATC1Q76KD6 591 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 VGLL2Q8N8G2 317 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 LENG1Q96BZ8 264 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 SUCLG2Q96I99 432 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 COA1Q9GZY4 146 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 SMC4Q9NTJ3 1288 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 GOLGA6AQ9NYA3 693 aa7.09□□□□□ -1.27
TMEM39A-212ENST00000497993 ZNF804BA4D1E1 1349 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 PITPNM2Q9BZ72 1349 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 PTPRFP10586 1907 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 PSMD14O00487 310 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms