RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ASH2LQ9UBL3 628 aa6.57□□□□□ -1.36
SMC4-227ENST00000497984 NPEPPSL1A6NEC2 478 aa6.56□□□□□ -1.36
SMC4-227ENST00000497984 SSBP05455 408 aaKnown RBP eCLIP6.56□□□□□ -1.369e-17■■■■■ 55.5
SMC4-227ENST00000497984 FXNQ16595 210 aa6.56□□□□□ -1.36
SMC4-227ENST00000497984 SLC10A6Q3KNW5 377 aa6.56□□□□□ -1.36
SMC4-227ENST00000497984 TMC5Q6UXY8 1006 aa6.56□□□□□ -1.36
SMC4-227ENST00000497984 KBTBD2Q8IY47 623 aa6.56□□□□□ -1.36
SMC4-227ENST00000497984 KLHL36Q8N4N3 616 aa6.56□□□□□ -1.36
SMC4-227ENST00000497984 GJB6O95452 261 aa6.55□□□□□ -1.36
SMC4-227ENST00000497984 FSHBP01225 129 aa6.55□□□□□ -1.36
SMC4-227ENST00000497984 PPP2R2AP63151 447 aa6.55□□□□□ -1.36
SMC4-227ENST00000497984 MAP4K2Q12851 820 aa6.55□□□□□ -1.36
SMC4-227ENST00000497984 CYP4F22Q6NT55 531 aa6.55□□□□□ -1.36
SMC4-227ENST00000497984 TTLL11Q8NHH1 800 aa6.55□□□□□ -1.36
SMC4-227ENST00000497984 KISS1RQ969F8 398 aaPredicted RBP6.55□□□□□ -1.36
SMC4-227ENST00000497984 WWC2-AS2Q96NR7 200 aa6.55□□□□□ -1.36
SMC4-227ENST00000497984 PTPN18Q99952 460 aa6.55□□□□□ -1.36
SMC4-227ENST00000497984 SCAND2PQ9GZW5 306 aaPredicted RBP6.55□□□□□ -1.36
SMC4-227ENST00000497984 KLC2Q9H0B6 622 aa6.55□□□□□ -1.36
SMC4-227ENST00000497984 FTSJ1Q9UET6 329 aa6.55□□□□□ -1.36
SMC4-227ENST00000497984 SRRDQ9UH36 339 aa6.55□□□□□ -1.36
SMC4-227ENST00000497984 MSCO60682 206 aa6.54□□□□□ -1.36
SMC4-227ENST00000497984 C6P13671 934 aa6.54□□□□□ -1.36
SMC4-227ENST00000497984 NFATC3Q12968 1075 aa6.54□□□□□ -1.36
SMC4-227ENST00000497984 TRMT10BQ6PF06 316 aaKnown RBP6.54□□□□□ -1.36
SMC4-227ENST00000497984 CRIP3Q6Q6R5 217 aa6.54□□□□□ -1.36
SMC4-227ENST00000497984 ARHGEF18Q6ZSZ5 1173 aa6.54□□□□□ -1.36
SMC4-227ENST00000497984 CIR1Q86X95 450 aaPredicted RBP6.54□□□□□ -1.36
SMC4-227ENST00000497984 JAM3Q9BX67 310 aa6.54□□□□□ -1.36
SMC4-227ENST00000497984 MEGF9Q9H1U4 602 aa6.54□□□□□ -1.36
SMC4-227ENST00000497984 EPN3Q9H201 632 aa6.54□□□□□ -1.36
SMC4-227ENST00000497984 SLC6A20Q9NP91 592 aa6.54□□□□□ -1.36
SMC4-227ENST00000497984 GPR27Q9NS67 375 aa6.54□□□□□ -1.36
SMC4-227ENST00000497984 PPARGC1AQ9UBK2 798 aaKnown RBP6.54□□□□□ -1.36
SMC4-227ENST00000497984 A0A1W2PQU0 124 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 B4GALT4O60513 344 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 MAFKO60675 156 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 KLHL18O94889 574 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 TACR2P21452 398 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 R3HDM1Q15032 1099 aaKnown RBP6.53□□□□□ -1.36
SMC4-227ENST00000497984 SLFN13Q68D06 897 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 EEPD1Q7L9B9 569 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 VPS37DQ86XT2 251 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 DTX3Q8N9I9 347 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 NUDT10Q8NFP7 164 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 PIP4K2CQ8TBX8 421 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 CLEC4DQ8WXI8 215 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 KCTD13Q8WZ19 329 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 NUDT11Q96G61 164 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 SORCS2Q96PQ0 1159 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 ADAM29Q9UKF5 820 aa6.53□□□□□ -1.36
SMC4-227ENST00000497984 PATE3B3GLJ2 98 aa6.52□□□□□ -1.37
SMC4-227ENST00000497984 KRIT1O00522 736 aa6.52□□□□□ -1.37
SMC4-227ENST00000497984 SLC27A2O14975 620 aa6.52□□□□□ -1.37
SMC4-227ENST00000497984 DLX3O60479 287 aa6.52□□□□□ -1.37
SMC4-227ENST00000497984 FGRP09769 529 aa6.52□□□□□ -1.37
SMC4-227ENST00000497984 PHF19Q5T6S3 580 aa6.52□□□□□ -1.37
SMC4-227ENST00000497984 IER2Q9BTL4 223 aa6.52□□□□□ -1.37
SMC4-227ENST00000497984 PDGFDQ9GZP0 370 aaPredicted RBP6.52□□□□□ -1.37
SMC4-227ENST00000497984 ZNF408Q9H9D4 720 aa6.52□□□□□ -1.37
SMC4-227ENST00000497984 BARX1Q9HBU1 254 aaPredicted RBP6.52□□□□□ -1.37
SMC4-227ENST00000497984 DLL4Q9NR61 685 aa6.52□□□□□ -1.37
SMC4-227ENST00000497984 GRIN1Q05586 938 aa6.51□□□□□ -1.37
SMC4-227ENST00000497984 ZNF585AQ6P3V2 769 aa6.51□□□□□ -1.37
SMC4-227ENST00000497984 TRIM48Q8IWZ4 208 aa6.51□□□□□ -1.37
SMC4-227ENST00000497984 RBM12BQ8IXT5 1001 aaKnown RBP6.51□□□□□ -1.37
SMC4-227ENST00000497984 CDK5RAP1Q96SZ6 601 aaKnown RBP6.51□□□□□ -1.37
SMC4-227ENST00000497984 ZNF747Q9BV97 191 aa6.51□□□□□ -1.37
SMC4-227ENST00000497984 ZDHHC9Q9Y397 364 aa6.51□□□□□ -1.37
SMC4-227ENST00000497984 CNOT4O95628 575 aaKnown RBP6.5□□□□□ -1.37
SMC4-227ENST00000497984 SLPIP03973 132 aa6.5□□□□□ -1.37
SMC4-227ENST00000497984 ERCC5P28715 1186 aaPredicted RBP6.5□□□□□ -1.37
SMC4-227ENST00000497984 ACVRL1P37023 503 aa6.5□□□□□ -1.37
SMC4-227ENST00000497984 SELENOPP49908 381 aa6.5□□□□□ -1.37
SMC4-227ENST00000497984 VASNQ6EMK4 673 aa6.5□□□□□ -1.37
SMC4-227ENST00000497984 RSPO2Q6UXX9 243 aaPredicted RBP6.5□□□□□ -1.37
SMC4-227ENST00000497984 OTOP3Q7RTS5 596 aa6.5□□□□□ -1.37
SMC4-227ENST00000497984 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.5□□□□□ -1.372e-9■■■■■ 161.6
SMC4-227ENST00000497984 PHF20Q9BVI0 1012 aa6.5□□□□□ -1.37
SMC4-227ENST00000497984 JADE2Q9NQC1 790 aa6.5□□□□□ -1.37
SMC4-227ENST00000497984 AGRPO00253 132 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 KNG1P01042 644 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 LTFP02788 710 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 FAHP16930 419 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 TUSC3Q13454 348 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 SMAD2Q15796 467 aaKnown RBP6.49□□□□□ -1.37
SMC4-227ENST00000497984 PAN2Q504Q3 1202 aaKnown RBP6.49□□□□□ -1.37
SMC4-227ENST00000497984 HABP4Q5JVS0 413 aaKnown RBP6.49□□□□□ -1.37
SMC4-227ENST00000497984 Q6ZUG5 572 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 USP53Q70EK8 1073 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 PALM2Q8IXS6 379 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 CELF2-AS1Q8N7Q2 184 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 UHMK1Q8TAS1 419 aaKnown RBP6.49□□□□□ -1.37
SMC4-227ENST00000497984 Q8TCH9 128 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 DEF6Q9H4E7 631 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 TELO2Q9Y4R8 837 aa6.49□□□□□ -1.37
SMC4-227ENST00000497984 SUV39H1O43463 412 aa6.48□□□□□ -1.37
SMC4-227ENST00000497984 ZNF623O75123 536 aa6.48□□□□□ -1.37
SMC4-227ENST00000497984 CHGBP05060 677 aa6.48□□□□□ -1.37
SMC4-227ENST00000497984 CKMP06732 381 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms