RNA–Protein interactions for RNA: ENST00000497236.1

CRIM1-208, Transcript of cysteine rich transmembrane BMP regulator 1, human

TSL 3

Gene CRIM1, Length 240 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRIM1-208	ENST00000497236	TMEM94	Q12767	1356 aa		3.11	□□□□□ -1.91
CRIM1-208	ENST00000497236	ZC3H13	Q5T200	1668 aa	Known RBP	3.11	□□□□□ -1.91
CRIM1-208	ENST00000497236	POGZ	Q7Z3K3	1410 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	ITSN1	Q15811	1721 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	KNDC1	Q76NI1	1749 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	A2ML1	A8K2U0	1454 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	CD163L1	Q9NR16	1453 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	TUBGCP6	Q96RT7	1819 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	ABCC6	O95255	1503 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	ZFYVE16	Q7Z3T8	1539 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	TULP4	Q9NRJ4	1543 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	DPPA5	A6NC42	116 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	PALM3	A6NDB9	673 aa	Predicted RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	FAM187A	A6NFU0	413 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	TMEM110-MUSTN1	A8MSY1	372 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236		A8MXQ7	604 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	RBAK-RBAKDN	I3L0D1	243 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	PODXL	O00592	558 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	CETN3	O15182	167 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	CTNND1	O60716	968 aa	Known RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	PFDN1	O60925	122 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	CBFA2T3	O75081	653 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	CSDE1	O75534	798 aa	Known RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	GFPT2	O94808	682 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	KIF4A	O95239	1232 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	GJB6	O95452	261 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	FMNL1	O95466	1100 aa	Predicted RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	CTDNEP1	O95476	244 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	GAS8	O95995	478 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	KRT14	P02533	472 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	ATP1A1	P05023	1023 aa	Known RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	CYP21A2	P08686	494 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	HMOX1	P09601	288 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	PARP1	P09874	1014 aa	Known RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	LINGO3	P0C6S8	592 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	FAM200B	P0CF97	657 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	SRGN	P10124	158 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	MYB	P10242	640 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	PDHB	P11177	359 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	VDR	P11473	427 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	TRIM21	P19474	475 aa	Known RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	S100A1	P23297	94 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	DNAJB2	P25686	324 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	VHL	P40337	213 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	LIFR	P42702	1097 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	RANBP1	P43487	201 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	MMP13	P45452	471 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	GNAQ	P50148	359 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	NEK2	P51955	445 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	COPB1	P53618	953 aa	Known RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	NPEPPS	P55786	919 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	PPP4C	P60510	307 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	TUBA4A	P68366	448 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	PHEX	P78562	749 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	ARHGAP4	P98171	946 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	AMPD3	Q01432	767 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	UBXN1	Q04323	297 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	NEXN	Q0ZGT2	675 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	STK3	Q13188	491 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	PNOC	Q13519	176 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	CYLC2	Q14093	348 aa	Predicted RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	KRT31	Q15323	416 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	INA	Q16352	499 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	NDUFA5	Q16718	116 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	SKIDA1	Q1XH10	827 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	CCDC153	Q494R4	210 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	LONRF3	Q496Y0	759 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	BEND3	Q5T5X7	828 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	SLC9C2	Q5TAH2	1124 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	MAP3K21	Q5TCX8	1036 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	C6orf163	Q5TEZ5	329 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	ZNF658	Q5TYW1	1059 aa	Predicted RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	DAB2IP	Q5VWQ8	1189 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	ARL6IP4	Q66PJ3	421 aa	Known RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	MFSD5	Q6N075	450 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	LMOD2	Q6P5Q4	547 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	SHC4	Q6S5L8	630 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	KSR2	Q6VAB6	950 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	PPP1R21	Q6ZMI0	780 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	ASRGL1	Q7L266	308 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	PODN	Q7Z5L7	613 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	RALYL	Q86SE5	291 aa	Known RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	TMEM110	Q86TL2	294 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	SGMS1	Q86VZ5	419 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	VPS37D	Q86XT2	251 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	MYLK4	Q86YV6	388 aa	Predicted RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	FOXP4	Q8IVH2	680 aa	Predicted RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	NOSTRIN	Q8IVI9	506 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	NELFCD	Q8IXH7	590 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	FAM186B	Q8IYM0	893 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	MB21D1	Q8N884	522 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	KLHDC4	Q8TBB5	520 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	ACTRT1	Q8TDG2	376 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	TRPC4AP	Q8TEL6	797 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	PIGO	Q8TEQ8	1089 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	AGAP11	Q8TF27	550 aa		3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	3.1	□□□□□ -1.91
CRIM1-208	ENST00000497236	RAPGEF5	Q92565	580 aa		3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms