RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 FAM47CQ5HY64 1035 aa25.89■■□□□ 1.74
CHRD-217ENST00000496527 CRYGNQ8WXF5 182 aa25.89■■□□□ 1.74
CHRD-217ENST00000496527 TRIM43Q96BQ3 446 aaPredicted RBP25.89■■□□□ 1.74
CHRD-217ENST00000496527 PHF20Q9BVI0 1012 aa25.89■■□□□ 1.74
CHRD-217ENST00000496527 MEIS1O00470 390 aa25.88■■□□□ 1.73
CHRD-217ENST00000496527 JAK2O60674 1132 aa25.88■■□□□ 1.73
CHRD-217ENST00000496527 ZNF286BP0CG31 522 aa25.88■■□□□ 1.73
CHRD-217ENST00000496527 MAGEA10P43363 369 aaPredicted RBP25.88■■□□□ 1.73
CHRD-217ENST00000496527 SP4Q02446 784 aa25.88■■□□□ 1.73
CHRD-217ENST00000496527 ST3GAL1Q11201 340 aa25.88■■□□□ 1.73
CHRD-217ENST00000496527 NFRKBQ6P4R8 1299 aa25.88■■□□□ 1.73
CHRD-217ENST00000496527 NIPA1Q7RTP0 329 aa25.88■■□□□ 1.73
CHRD-217ENST00000496527 KAT2BQ92831 832 aa25.88■■□□□ 1.73
CHRD-217ENST00000496527 KATNAL1Q9BW62 490 aa25.88■■□□□ 1.73
CHRD-217ENST00000496527 COLQQ9Y215 455 aaPredicted RBP25.88■■□□□ 1.73
CHRD-217ENST00000496527 KIAA0355O15063 1070 aa25.87■■□□□ 1.73
CHRD-217ENST00000496527 ARP10275 920 aa25.87■■□□□ 1.73
CHRD-217ENST00000496527 MDM2Q00987 491 aaPredicted RBP25.87■■□□□ 1.73
CHRD-217ENST00000496527 NPY5RQ15761 445 aa25.87■■□□□ 1.73
CHRD-217ENST00000496527 PLA2G4DQ86XP0 818 aa25.87■■□□□ 1.73
CHRD-217ENST00000496527 GPR20Q99678 358 aa25.87■■□□□ 1.73
CHRD-217ENST00000496527 GDF15Q99988 308 aa25.87■■□□□ 1.73
CHRD-217ENST00000496527 PCDH10Q9P2E7 1040 aa25.87■■□□□ 1.73
CHRD-217ENST00000496527 DNAH12Q6ZR08 3092 aa25.87■■□□□ 1.73
CHRD-217ENST00000496527 SCN10AQ9Y5Y9 1956 aa25.86■■□□□ 1.73
CHRD-217ENST00000496527 FAM86B1E9PN63 330 aa25.86■■□□□ 1.73
CHRD-217ENST00000496527 CD4P01730 458 aa25.86■■□□□ 1.73
CHRD-217ENST00000496527 FAM86B2P0C5J1 330 aa25.86■■□□□ 1.73
CHRD-217ENST00000496527 RAG1P15918 1043 aa25.86■■□□□ 1.73
CHRD-217ENST00000496527 PSEN2P49810 448 aa25.86■■□□□ 1.73
CHRD-217ENST00000496527 PTPN11Q06124 597 aaPredicted RBP25.86■■□□□ 1.73
CHRD-217ENST00000496527 SDF4Q9BRK5 362 aa25.86■■□□□ 1.73
CHRD-217ENST00000496527 LLPHQ9BRT6 129 aaKnown RBP25.86■■□□□ 1.73
CHRD-217ENST00000496527 TRPV6Q9H1D0 765 aa25.86■■□□□ 1.73
CHRD-217ENST00000496527 GJB4Q9NTQ9 266 aa25.86■■□□□ 1.73
CHRD-217ENST00000496527 M0R2N6 131 aa25.85■■□□□ 1.73
CHRD-217ENST00000496527 B4GALT4O60513 344 aa25.85■■□□□ 1.73
CHRD-217ENST00000496527 F2P00734 622 aa25.85■■□□□ 1.73
CHRD-217ENST00000496527 USP11P51784 963 aa25.85■■□□□ 1.73
CHRD-217ENST00000496527 MFSD10Q14728 455 aa25.85■■□□□ 1.73
CHRD-217ENST00000496527 PPP1R13LQ8WUF5 828 aa25.85■■□□□ 1.73
CHRD-217ENST00000496527 AGO4Q9HCK5 861 aaKnown RBP25.85■■□□□ 1.73
CHRD-217ENST00000496527 TBX21Q9UL17 535 aa25.85■■□□□ 1.73
CHRD-217ENST00000496527 LGALS2P05162 132 aa25.84■■□□□ 1.73
CHRD-217ENST00000496527 SUPT20HL2P0C7V6 817 aa25.84■■□□□ 1.73
CHRD-217ENST00000496527 CIITAP33076 1130 aa25.84■■□□□ 1.73
CHRD-217ENST00000496527 SETQ01105 290 aaPredicted RBP25.84■■□□□ 1.73
CHRD-217ENST00000496527 KIAA0753Q2KHM9 967 aa25.84■■□□□ 1.73
CHRD-217ENST00000496527 KRT25Q7Z3Z0 450 aa25.84■■□□□ 1.73
CHRD-217ENST00000496527 TBCKQ8TEA7 893 aa25.84■■□□□ 1.73
CHRD-217ENST00000496527 C16orf70Q9BSU1 422 aa25.84■■□□□ 1.73
CHRD-217ENST00000496527 JPH1Q9HDC5 661 aaPredicted RBP25.84■■□□□ 1.73
CHRD-217ENST00000496527 TRMT13Q9NUP7 481 aaKnown RBP25.84■■□□□ 1.73
CHRD-217ENST00000496527 NFASCO94856 1347 aa25.84■■□□□ 1.73
CHRD-217ENST00000496527 IGLV3-22A0A075B6J6 115 aa25.83■■□□□ 1.73
CHRD-217ENST00000496527 CCDC194A0A1B0GVG4 234 aa25.83■■□□□ 1.73
CHRD-217ENST00000496527 BMP8BP34820 402 aa25.83■■□□□ 1.73
CHRD-217ENST00000496527 TRIM29Q14134 588 aa25.83■■□□□ 1.73
CHRD-217ENST00000496527 NONOQ15233 471 aaKnown RBP eCLIP25.83■■□□□ 1.73
CHRD-217ENST00000496527 PRR16Q569H4 304 aa25.83■■□□□ 1.73
CHRD-217ENST00000496527 UTP14CQ5TAP6 766 aaKnown RBP25.83■■□□□ 1.73
CHRD-217ENST00000496527 C7orf31Q8N865 590 aa25.83■■□□□ 1.73
CHRD-217ENST00000496527 SEPT1Q8WYJ6 367 aa25.83■■□□□ 1.73
CHRD-217ENST00000496527 BADQ92934 168 aa25.83■■□□□ 1.73
CHRD-217ENST00000496527 UBE2OQ9C0C9 1292 aaKnown RBP25.83■■□□□ 1.73
CHRD-217ENST00000496527 BRMS1Q9HCU9 246 aa25.83■■□□□ 1.73
CHRD-217ENST00000496527 SLC9A2Q9UBY0 812 aa25.83■■□□□ 1.73
CHRD-217ENST00000496527 TELO2Q9Y4R8 837 aa25.83■■□□□ 1.73
CHRD-217ENST00000496527 DOCK5Q9H7D0 1870 aa25.83■■□□□ 1.72
CHRD-217ENST00000496527 H3BRB1 525 aa25.82■■□□□ 1.72
CHRD-217ENST00000496527 HAS3O00219 553 aa25.82■■□□□ 1.72
CHRD-217ENST00000496527 TIMP1P01033 207 aa25.82■■□□□ 1.72
CHRD-217ENST00000496527 ITGB8P26012 769 aa25.82■■□□□ 1.72
CHRD-217ENST00000496527 MCM2P49736 904 aa25.82■■□□□ 1.72
CHRD-217ENST00000496527 SESTD1Q86VW0 696 aa25.82■■□□□ 1.72
CHRD-217ENST00000496527 PRO3102Q9H379 93 aa25.82■■□□□ 1.72
CHRD-217ENST00000496527 TUT1Q9H6E5 874 aaKnown RBP25.82■■□□□ 1.72
CHRD-217ENST00000496527 KRT2P35908 639 aa25.81■■□□□ 1.72
CHRD-217ENST00000496527 TCF7P36402 384 aaPredicted RBP25.81■■□□□ 1.72
CHRD-217ENST00000496527 FOSBP53539 338 aa25.81■■□□□ 1.72
CHRD-217ENST00000496527 HMGN5P82970 282 aaKnown RBP25.81■■□□□ 1.72
CHRD-217ENST00000496527 ITGB3BPQ13352 177 aaPredicted RBP25.81■■□□□ 1.72
CHRD-217ENST00000496527 ZNF577Q9BSK1 485 aa25.81■■□□□ 1.72
CHRD-217ENST00000496527 HDAC6Q9UBN7 1215 aa25.81■■□□□ 1.72
CHRD-217ENST00000496527 ZNF215Q9UL58 517 aaPredicted RBP25.81■■□□□ 1.72
CHRD-217ENST00000496527 NOD1Q9Y239 953 aa25.81■■□□□ 1.72
CHRD-217ENST00000496527 GSTTP1A0A1W2PQM5 241 aa25.8■■□□□ 1.72
CHRD-217ENST00000496527 IPO5O00410 1097 aaKnown RBP25.8■■□□□ 1.72
CHRD-217ENST00000496527 INF2Q27J81 1249 aa25.8■■□□□ 1.72
CHRD-217ENST00000496527 OXER1Q8TDS5 423 aa25.8■■□□□ 1.72
CHRD-217ENST00000496527 PPP1R12CQ9BZL4 782 aa25.8■■□□□ 1.72
CHRD-217ENST00000496527 HIPK3Q9H422 1215 aa25.8■■□□□ 1.72
CHRD-217ENST00000496527 EDIL3O43854 480 aa25.79■■□□□ 1.72
CHRD-217ENST00000496527 PTGISQ16647 500 aa25.79■■□□□ 1.72
CHRD-217ENST00000496527 KRT40Q6A162 431 aa25.79■■□□□ 1.72
CHRD-217ENST00000496527 TRIM50Q86XT4 487 aa25.79■■□□□ 1.72
CHRD-217ENST00000496527 FAM184AQ8NB25 1140 aa25.79■■□□□ 1.72
CHRD-217ENST00000496527 UIMC1Q96RL1 719 aa25.79■■□□□ 1.72
CHRD-217ENST00000496527 GTF2IRD1Q9UHL9 959 aa25.79■■□□□ 1.72
CHRD-217ENST00000496527 DDX39AO00148 427 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms