RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 GSTA2P09210 222 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 DPEP1P16444 411 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 HNRNPH3P31942 346 aaKnown RBP9.94□□□□□ -0.82
HPS4-217ENST00000496385 EIF3BP55884 814 aaKnown RBP9.94□□□□□ -0.82
HPS4-217ENST00000496385 GUCY2DQ02846 1103 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 PARP10Q53GL7 1025 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 CHST3Q7LGC8 479 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 RBM12Q9NTZ6 932 aaKnown RBP9.94□□□□□ -0.82
HPS4-217ENST00000496385 SAMD15Q9P1V8 674 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 CTNND2Q9UQB3 1225 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 PDS5AQ29RF7 1337 aaKnown RBP9.93□□□□□ -0.82
HPS4-217ENST00000496385 PJA2O43164 708 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 CREB3O43889 395 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 ATP2C2O75185 946 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 PENKP01210 267 aaPredicted RBP9.93□□□□□ -0.82
HPS4-217ENST00000496385 ABCD1P33897 745 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 IARSP41252 1262 aaKnown RBP9.93□□□□□ -0.82
HPS4-217ENST00000496385 RANBP1P43487 201 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 METAP2P50579 478 aaKnown RBP eCLIP9.93□□□□□ -0.82
HPS4-217ENST00000496385 RALYLQ86SE5 291 aaKnown RBP9.93□□□□□ -0.82
HPS4-217ENST00000496385 LZICQ8WZA0 190 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 ZNF317Q96PQ6 595 aaPredicted RBP9.93□□□□□ -0.82
HPS4-217ENST00000496385 TTYH3Q9C0H2 523 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 TNRC6CQ9HCJ0 1690 aaKnown RBP9.93□□□□□ -0.82
HPS4-217ENST00000496385 COL24A1Q17RW2 1714 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 ANKRD31Q8N7Z5 1873 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 MACROD2A1Z1Q3 448 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 CES2O00748 559 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 IRS4O14654 1257 aaPredicted RBP9.93□□□□□ -0.82
HPS4-217ENST00000496385 RNF113AO15541 343 aaKnown RBP9.93□□□□□ -0.82
HPS4-217ENST00000496385 MYBP10242 640 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 PYGBP11216 843 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 GBP1P32455 592 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 HSD17B3P37058 310 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 MATR3P43243 847 aaKnown RBP eCLIP9.93□□□□□ -0.82
HPS4-217ENST00000496385 PSMC4P43686 418 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 CD151P48509 253 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 TNNC1P63316 161 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 DPY19L2Q6NUT2 758 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 C2CD5Q86YS7 1000 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 GRAMD1CQ8IYS0 662 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 IFT81Q8WYA0 676 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 CCDC42Q96M95 316 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 KRT23Q9C075 422 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 NYXQ9GZU5 481 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 RAB17Q9H0T7 212 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 THAP9Q9H5L6 903 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 SEC31BQ9NQW1 1179 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.93□□□□□ -0.82
HPS4-217ENST00000496385 BLOC1S6Q9UL45 172 aa9.93□□□□□ -0.82
HPS4-217ENST00000496385 FAM163BP0C2L3 166 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 SRGNP10124 158 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 CTNNA1P35221 906 aaKnown RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 SKIV2L2P42285 1042 aaKnown RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 PPARAQ07869 468 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 ZNF844Q08AG5 666 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 MAP3K12Q12852 859 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 RRP12Q5JTH9 1297 aaKnown RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 CASKIN2Q8WXE0 1202 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 TBC1D5Q92609 795 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 ARHGEF3Q9NR81 526 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 PAG1Q9NWQ8 432 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 ANGEL1Q9UNK9 670 aaKnown RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 PHF20L1A8MW92 1017 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 EVI5O60447 810 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 HIP1RO75146 1068 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 KIF4AO95239 1232 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 PARP1P09874 1014 aaKnown RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 ATP6V1C1P21283 382 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 TMOD1P28289 359 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 TOB1P50616 345 aaPredicted RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 CCDC96Q2M329 555 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 GALNTL6Q49A17 601 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 PPP1R15BQ5SWA1 713 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 ZNF658Q5TYW1 1059 aaPredicted RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 C10orf71Q711Q0 1435 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 DDX46Q7L014 1031 aaKnown RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 CROCCP2Q86T23 111 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 ZBTB38Q8NAP3 1195 aaPredicted RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 FERMT2Q96AC1 680 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 GPR108Q9NPR9 543 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 C2CD2Q9Y426 696 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 MAST3O60307 1309 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 TAF1P21675 1872 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 BHMG1C9JSJ3 638 aaPredicted RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 MMP1P03956 469 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 ALDH5A1P51649 535 aaPredicted RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 KLC1Q07866 573 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 TRIM28Q13263 835 aaKnown RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 EPHA10Q5JZY3 1008 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 RRAGBQ5VZM2 374 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 ANO7Q6IWH7 933 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 NFRKBQ6P4R8 1299 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 ARHGAP18Q8N392 663 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 SH3TC2Q8TF17 1288 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.92□□□□□ -0.82
HPS4-217ENST00000496385 TLCD1Q96CP7 247 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 IFIH1Q9BYX4 1025 aaKnown RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 DMAP1Q9NPF5 467 aaPredicted RBP9.92□□□□□ -0.82
HPS4-217ENST00000496385 INCENPQ9NQS7 918 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms