RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 GPR20Q99678 358 aa16.57■□□□□ 0.24
PDAP1-204ENST00000496335 SENP7Q9BQF6 1050 aa16.57■□□□□ 0.24
PDAP1-204ENST00000496335 C16orf70Q9BSU1 422 aa16.57■□□□□ 0.24
PDAP1-204ENST00000496335 KATNAL1Q9BW62 490 aa16.57■□□□□ 0.24
PDAP1-204ENST00000496335 RNF26Q9BY78 433 aaPredicted RBP16.57■□□□□ 0.24
PDAP1-204ENST00000496335 EHMT1Q9H9B1 1298 aa16.57■□□□□ 0.24
PDAP1-204ENST00000496335 IL23AQ9NPF7 189 aa16.57■□□□□ 0.24
PDAP1-204ENST00000496335 FOSP01100 380 aaPredicted RBP16.56■□□□□ 0.24
PDAP1-204ENST00000496335 LGALS2P05162 132 aa16.56■□□□□ 0.24
PDAP1-204ENST00000496335 KCNA2P16389 499 aa16.56■□□□□ 0.24
PDAP1-204ENST00000496335 ZNF200P98182 395 aaPredicted RBP16.56■□□□□ 0.24
PDAP1-204ENST00000496335 MTMR1Q13613 665 aa16.56■□□□□ 0.24
PDAP1-204ENST00000496335 VWCEQ96DN2 955 aa16.56■□□□□ 0.24
PDAP1-204ENST00000496335 ZMYND12Q9H0C1 365 aa16.56■□□□□ 0.24
PDAP1-204ENST00000496335 GLT8D2Q9H1C3 349 aa16.56■□□□□ 0.24
PDAP1-204ENST00000496335 JADE2Q9NQC1 790 aa16.56■□□□□ 0.24
PDAP1-204ENST00000496335 GTF2IRD1Q9UHL9 959 aa16.56■□□□□ 0.24
PDAP1-204ENST00000496335 TET1Q8NFU7 2136 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 ESYT2A0FGR8 921 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 H3BRB1 525 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 ANAPC15P60006 121 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 AP3B2Q13367 1082 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 HIC1Q14526 733 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 UTP14CQ5TAP6 766 aaKnown RBP16.55■□□□□ 0.24
PDAP1-204ENST00000496335 GPR153Q6NV75 609 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 TRIM50Q86XT4 487 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 TEX2Q8IWB9 1127 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 DEFB123Q8N688 67 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 DHX38Q92620 1227 aaKnown RBP16.55■□□□□ 0.24
PDAP1-204ENST00000496335 CDHR1Q96JP9 859 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 MXRA8Q9BRK3 442 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 TUT1Q9H6E5 874 aaKnown RBP16.55■□□□□ 0.24
PDAP1-204ENST00000496335 C6orf50Q9HD87 102 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 KAT6AQ92794 2004 aa16.55■□□□□ 0.24
PDAP1-204ENST00000496335 RBAK-RBAKDNI3L0D1 243 aa16.54■□□□□ 0.24
PDAP1-204ENST00000496335 CPLX1O14810 134 aa16.54■□□□□ 0.24
PDAP1-204ENST00000496335 FGBP02675 491 aa16.54■□□□□ 0.24
PDAP1-204ENST00000496335 ARP10275 920 aa16.54■□□□□ 0.24
PDAP1-204ENST00000496335 SREBF1P36956 1147 aa16.54■□□□□ 0.24
PDAP1-204ENST00000496335 SSRP1Q08945 709 aaKnown RBP16.54■□□□□ 0.24
PDAP1-204ENST00000496335 FAM109BQ6ICB4 259 aaPredicted RBP16.54■□□□□ 0.24
PDAP1-204ENST00000496335 PSRC1Q6PGN9 363 aaPredicted RBP16.54■□□□□ 0.24
PDAP1-204ENST00000496335 DEFB128Q7Z7B8 93 aa16.54■□□□□ 0.24
PDAP1-204ENST00000496335 RETREG2Q8NC44 543 aa16.54■□□□□ 0.24
PDAP1-204ENST00000496335 GIMAP8Q8ND71 665 aaPredicted RBP16.54■□□□□ 0.24
PDAP1-204ENST00000496335 RASGRP4Q8TDF6 673 aa16.54■□□□□ 0.24
PDAP1-204ENST00000496335 CCDC12Q8WUD4 166 aaPredicted RBP16.54■□□□□ 0.24
PDAP1-204ENST00000496335 KCNH7Q9NS40 1196 aa16.54■□□□□ 0.24
PDAP1-204ENST00000496335 VPS54Q9P1Q0 977 aa16.54■□□□□ 0.24
PDAP1-204ENST00000496335 TANC1Q9C0D5 1861 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 PITPNM1O00562 1244 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 MAFGO15525 162 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 DTNBO60941 627 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 IQCF3P0C7M6 154 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 ARHGAP4P98171 946 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 BFSP2Q13515 415 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 CEP55Q53EZ4 464 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 RASIP1Q5U651 963 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 OTOP2Q7RTS6 562 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 TRIM22Q8IYM9 498 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 REXO1Q8N1G1 1221 aaKnown RBP16.53■□□□□ 0.24
PDAP1-204ENST00000496335 CXXC1Q9P0U4 656 aaPredicted RBP16.53■□□□□ 0.24
PDAP1-204ENST00000496335 TPCN1Q9ULQ1 816 aa16.53■□□□□ 0.24
PDAP1-204ENST00000496335 GSTTP1A0A1W2PQM5 241 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 MEIS1O00470 390 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 SMIM10L2AP0DMW4 78 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 SMIM10L2BP0DMW5 78 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 GNA11P29992 359 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 TCF7P36402 384 aaPredicted RBP16.52■□□□□ 0.24
PDAP1-204ENST00000496335 ZNF76P36508 570 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 AK2P54819 239 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 SMAD3P84022 425 aaKnown RBP16.52■□□□□ 0.24
PDAP1-204ENST00000496335 SCRN1Q12765 414 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 RPUSD2Q8IZ73 545 aaKnown RBP16.52■□□□□ 0.24
PDAP1-204ENST00000496335 HERVK_113Q902F9 699 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 WNT8BQ93098 351 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 FAM161BQ96MY7 647 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 AIFM3Q96NN9 605 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 UIMC1Q96RL1 719 aa16.52■□□□□ 0.24
PDAP1-204ENST00000496335 MYO9BQ13459 2157 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.51■□□□□ 0.23
PDAP1-204ENST00000496335 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.51■□□□□ 0.23
PDAP1-204ENST00000496335 C17orf102A2RUQ5 167 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 GRXCR1A8MXD5 290 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 FAM86B1E9PN63 330 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 FAM86B2P0C5J1 330 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 NLRP5P59047 1200 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 PTK7Q13308 1070 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 ITGB3BPQ13352 177 aaPredicted RBP16.51■□□□□ 0.23
PDAP1-204ENST00000496335 CPLX2Q6PUV4 134 aaKnown RBP16.51■□□□□ 0.23
PDAP1-204ENST00000496335 CCDC155Q8N6L0 562 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 CCDC148Q8NFR7 591 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 CRYGNQ8WXF5 182 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 SEPT1Q8WYJ6 367 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 SLKQ9H2G2 1235 aaPredicted RBP16.51■□□□□ 0.23
PDAP1-204ENST00000496335 RNPEPQ9H4A4 650 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 MTMR10Q9NXD2 777 aa16.51■□□□□ 0.23
PDAP1-204ENST00000496335 PFKFB2O60825 505 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms