RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 TIFAQ96CG3 184 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 BPIFA3Q9BQP9 254 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 AXDND1Q5T1B0 1012 aaPredicted RBP9.59□□□□□ -0.87
VPS13B-206ENST00000496144 DEFB128Q7Z7B8 93 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 EXOC8Q8IYI6 725 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 SLC38A10Q9HBR0 1119 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 FBXO28Q9NVF7 368 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 PHF24Q9UPV7 400 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 RWDD3Q9Y3V2 267 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 A0A1W2PQ45 241 aaPredicted RBP9.59□□□□□ -0.87
VPS13B-206ENST00000496144 A0A1W2PQY0 241 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 DEXIO95424 95 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 CMA1P23946 247 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 GUCY1A2P33402 732 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 NLRP5P59047 1200 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 ZNF654Q8IZM8 581 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 KCNF1Q9H3M0 494 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 TNKSO95271 1327 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 EMSYQ7Z589 1322 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 ZSCAN20P17040 1043 aaPredicted RBP9.59□□□□□ -0.87
VPS13B-206ENST00000496144 ZNF75DP51815 510 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 IQCB1Q15051 598 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 SF3A1Q15459 793 aaKnown RBP9.59□□□□□ -0.87
VPS13B-206ENST00000496144 RESP18Q5W5W9 173 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 MIS18BP1Q6P0N0 1132 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 XRRA1Q6P2D8 792 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 NAP1L5Q96NT1 182 aaPredicted RBP9.59□□□□□ -0.87
VPS13B-206ENST00000496144 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.59□□□□□ -0.87
VPS13B-206ENST00000496144 ROBO3Q96MS0 1386 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 FAM237AA0A1B0GTK4 181 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 GOLGA6L6A8MZA4 724 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 CYBAP13498 195 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 EIF2AK2P19525 551 aaKnown RBP9.59□□□□□ -0.87
VPS13B-206ENST00000496144 SNAP25P60880 206 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 ITGA7Q13683 1181 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 SARM1Q6SZW1 724 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 MKL1Q969V6 931 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 FAM161BQ96MY7 647 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 R3HCC1Q9Y3T6 440 aaKnown RBP9.59□□□□□ -0.87
VPS13B-206ENST00000496144 A0A1B0GVL5 298 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 METTL16Q86W50 562 aaKnown RBP9.58□□□□□ -0.88
VPS13B-206ENST00000496144 NPLOC4Q8TAT6 608 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 MICAL1Q8TDZ2 1067 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 TIGD1Q96MW7 591 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 ZNF646O15015 1829 aaPredicted RBP9.58□□□□□ -0.88
VPS13B-206ENST00000496144 PNMA6FA0A0J9YX94 578 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 CARNS1A5YM72 827 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 PALM3A6NDB9 673 aaPredicted RBP9.58□□□□□ -0.88
VPS13B-206ENST00000496144 SSTR3P32745 418 aaPredicted RBP9.58□□□□□ -0.88
VPS13B-206ENST00000496144 Q3C1V9 767 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 FBXO16Q8IX29 292 aaPredicted RBP9.58□□□□□ -0.88
VPS13B-206ENST00000496144 FOXP1Q9H334 677 aaPredicted RBP9.58□□□□□ -0.88
VPS13B-206ENST00000496144 NRBP2Q9NSY0 501 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 ANO10Q9NW15 660 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 PFKFB1P16118 471 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 AGBL1Q96MI9 1066 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 CRISPLD2Q9H0B8 497 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 THSD7BQ9C0I4 1608 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 PTGISQ16647 500 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 ENAHQ8N8S7 591 aaPredicted RBP9.58□□□□□ -0.88
VPS13B-206ENST00000496144 FANCBQ8NB91 859 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 YME1L1Q96TA2 773 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 JPH2Q9BR39 696 aaPredicted RBP9.58□□□□□ -0.88
VPS13B-206ENST00000496144 UBA5Q9GZZ9 404 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 PSTPIP2Q9H939 334 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 IL23AQ9NPF7 189 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 HPSEQ9Y251 543 aa9.58□□□□□ -0.88
VPS13B-206ENST00000496144 TLL1O43897 1013 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 ASGR1P07306 291 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 GOLGA8HP0CJ92 632 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 ZNF165P49910 485 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 ALDH5A1P51649 535 aaPredicted RBP9.57□□□□□ -0.88
VPS13B-206ENST00000496144 NOSTRINQ8IVI9 506 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 TMEM265A0A087WTH1 108 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 ZBTB5O15062 677 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 ZNF830Q96NB3 372 aaPredicted RBP9.57□□□□□ -0.88
VPS13B-206ENST00000496144 TXNRD2Q9NNW7 524 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 GJD2Q9UKL4 321 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 SCN9AQ15858 1988 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 TERF1P54274 439 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 CLEC10AQ8IUN9 316 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 FAM193BQ96PV7 902 aaPredicted RBP9.57□□□□□ -0.88
VPS13B-206ENST00000496144 MORC2Q9Y6X9 1032 aaPredicted RBP9.57□□□□□ -0.88
VPS13B-206ENST00000496144 SMIM22K7EJ46 135 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 ATP2A1O14983 1001 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 EIF3JO75822 258 aaKnown RBP9.57□□□□□ -0.88
VPS13B-206ENST00000496144 ZNF543Q08ER8 600 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 DIS3LQ8TF46 1054 aaKnown RBP9.57□□□□□ -0.88
VPS13B-206ENST00000496144 RNF26Q9BY78 433 aaPredicted RBP9.57□□□□□ -0.88
VPS13B-206ENST00000496144 CCDC194A0A1B0GVG4 234 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 CUTAO60888 179 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 BMP8BP34820 402 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 SHC4Q6S5L8 630 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 ELOA2Q8IYF1 753 aaPredicted RBP9.57□□□□□ -0.88
VPS13B-206ENST00000496144 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.57□□□□□ -0.88
VPS13B-206ENST00000496144 SPTLC3Q9NUV7 552 aa9.57□□□□□ -0.88
VPS13B-206ENST00000496144 ZNF202O95125 648 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 TIMP1P01033 207 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 TPM2P07951 284 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 NLRP12P59046 1061 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms