RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 DPF3Q92784 378 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 CCDC47Q96A33 483 aaKnown RBP18.26■□□□□ 0.51
CBX4-204ENST00000495122 CALML4Q96GE6 196 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 APBA2Q99767 749 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 LRRC27Q9C0I9 530 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 STK17AQ9UEE5 414 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 DNAH12Q6ZR08 3092 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 PRKAR2AP13861 404 aaKnown RBP18.25■□□□□ 0.51
CBX4-204ENST00000495122 BMP6P22004 513 aa18.25■□□□□ 0.51
CBX4-204ENST00000495122 RGS2P41220 211 aa18.25■□□□□ 0.51
CBX4-204ENST00000495122 STAT2P52630 851 aa18.25■□□□□ 0.51
CBX4-204ENST00000495122 CCNA1P78396 465 aa18.25■□□□□ 0.51
CBX4-204ENST00000495122 FANCCQ00597 558 aa18.25■□□□□ 0.51
CBX4-204ENST00000495122 ANKLE1Q8NAG6 615 aa18.25■□□□□ 0.51
CBX4-204ENST00000495122 RASSF8Q8NHQ8 419 aa18.25■□□□□ 0.51
CBX4-204ENST00000495122 MBOAT7Q96N66 472 aa18.25■□□□□ 0.51
CBX4-204ENST00000495122 VCPKMTQ9H867 229 aa18.25■□□□□ 0.51
CBX4-204ENST00000495122 KBTBD4Q9NVX7 518 aa18.25■□□□□ 0.51
CBX4-204ENST00000495122 PNMA2Q9UL42 364 aa18.25■□□□□ 0.51
CBX4-204ENST00000495122 COLQQ9Y215 455 aaPredicted RBP18.25■□□□□ 0.51
CBX4-204ENST00000495122 A0A087WWV3 80 aa18.24■□□□□ 0.51
CBX4-204ENST00000495122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.24■□□□□ 0.51
CBX4-204ENST00000495122 TMEM232C9JQI7 657 aa18.24■□□□□ 0.51
CBX4-204ENST00000495122 PIK3CDO00329 1044 aa18.24■□□□□ 0.51
CBX4-204ENST00000495122 TBX3O15119 743 aa18.24■□□□□ 0.51
CBX4-204ENST00000495122 AFMP43652 599 aa18.24■□□□□ 0.51
CBX4-204ENST00000495122 MAP2K5Q13163 448 aa18.24■□□□□ 0.51
CBX4-204ENST00000495122 CCL14Q16627 93 aa18.24■□□□□ 0.51
CBX4-204ENST00000495122 SPC24Q8NBT2 197 aa18.24■□□□□ 0.51
CBX4-204ENST00000495122 CCDC150Q8NCX0 1101 aa18.24■□□□□ 0.51
CBX4-204ENST00000495122 DIS3LQ8TF46 1054 aaKnown RBP18.24■□□□□ 0.51
CBX4-204ENST00000495122 TMEM260Q9NX78 707 aa18.24■□□□□ 0.51
CBX4-204ENST00000495122 RANBP2P49792 3224 aaKnown RBP18.24■□□□□ 0.51
CBX4-204ENST00000495122 LTBP2Q14767 1821 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 NRDCO43847 1150 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 ZNF18P17022 549 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 IKQ13123 557 aaPredicted RBP18.23■□□□□ 0.51
CBX4-204ENST00000495122 KARSQ15046 597 aaKnown RBP18.23■□□□□ 0.51
CBX4-204ENST00000495122 ZNF658Q5TYW1 1059 aaPredicted RBP18.23■□□□□ 0.51
CBX4-204ENST00000495122 SPATA1Q5VX52 437 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 CCDC186Q7Z3E2 898 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 GRAMD1CQ8IYS0 662 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 KCTD17Q8N5Z5 321 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 LPAR1Q92633 364 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 PAWRQ96IZ0 340 aaKnown RBP18.23■□□□□ 0.51
CBX4-204ENST00000495122 TANGO6Q9C0B7 1094 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 HSD3B7Q9H2F3 369 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 SPTLC3Q9NUV7 552 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 FEM1BQ9UK73 627 aa18.23■□□□□ 0.51
CBX4-204ENST00000495122 SLC15A5A6NIM6 579 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 OFD1O75665 1012 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 RPN1P04843 607 aaKnown RBP18.22■□□□□ 0.51
CBX4-204ENST00000495122 MNX1P50219 401 aaPredicted RBP18.22■□□□□ 0.51
CBX4-204ENST00000495122 CACNB2Q08289 660 aaPredicted RBP18.22■□□□□ 0.51
CBX4-204ENST00000495122 CUL4BQ13620 913 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 GRB14Q14449 540 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 COG2Q14746 738 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 CNNM4Q6P4Q7 775 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 SLFN12Q8IYM2 578 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 CTAGE1Q96RT6 745 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 ANO3Q9BYT9 981 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 XPO4Q9C0E2 1151 aaKnown RBP18.22■□□□□ 0.51
CBX4-204ENST00000495122 EHMT1Q9H9B1 1298 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 IFNKQ9P0W0 207 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 LRWD1Q9UFC0 647 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 DDX25Q9UHL0 483 aaKnown RBP18.22■□□□□ 0.51
CBX4-204ENST00000495122 OGDHLQ9ULD0 1010 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 PRR12Q9ULL5 1215 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 SYNRGQ9UMZ2 1314 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 KDM3AQ9Y4C1 1321 aa18.22■□□□□ 0.51
CBX4-204ENST00000495122 RAD21O60216 631 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 SERPINC1P01008 464 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 PTGS1P23219 599 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 SPAG1Q07617 926 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 STIM1Q13586 685 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 COBLL1Q53SF7 1204 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 NAALADL2Q58DX5 795 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 WDR78Q5VTH9 848 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 ISM2Q6H9L7 571 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 NECAB2Q7Z6G3 386 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 SAMD3Q8N6K7 520 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 KIAA1524Q8TCG1 905 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 C7orf25Q9BPX7 421 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 RANBP17Q9H2T7 1088 aaKnown RBP18.21■□□□□ 0.51
CBX4-204ENST00000495122 TTC12Q9H892 705 aaPredicted RBP18.21■□□□□ 0.51
CBX4-204ENST00000495122 FLRT1Q9NZU1 646 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 RWDD2AQ9UIY3 292 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 NFE2L3Q9Y4A8 694 aa18.21■□□□□ 0.51
CBX4-204ENST00000495122 MYH7BA7E2Y1 1941 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 MEIS2O14770 477 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 WDR46O15213 610 aaKnown RBP18.2■□□□□ 0.5
CBX4-204ENST00000495122 RHOBTB3O94955 611 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 CYP3A4P08684 503 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 HOXC6P09630 235 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 CCND3P30281 292 aaPredicted RBP18.2■□□□□ 0.5
CBX4-204ENST00000495122 DSG3P32926 999 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 CIITAP33076 1130 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 SREBF1P36956 1147 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 KCNJ6P48051 423 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms