RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 HOXD13P35453 343 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 MTIF2P46199 727 aaKnown RBP11.57□□□□□ -0.56
SAMM50-206ENST00000494795 TBC1D8BQ0IIM8 1120 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 MUM1L1Q5H9M0 696 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 LRRC55Q6ZSA7 311 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 PANX2Q96RD6 677 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 FEZ1Q99689 392 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 NOC4LQ9BVI4 516 aaKnown RBP11.57□□□□□ -0.56
SAMM50-206ENST00000494795 THAP9Q9H5L6 903 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 ZSWIM4Q9H7M6 989 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 RAVER2Q9HCJ3 691 aaKnown RBP11.57□□□□□ -0.56
SAMM50-206ENST00000494795 STK17AQ9UEE5 414 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 HACL1Q9UJ83 578 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 TELO2Q9Y4R8 837 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 TMEM150BA6NC51 233 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 RCCD1A6NED2 376 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 ZNF76P36508 570 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 MMP14P50281 582 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 CNNM4Q6P4Q7 775 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 SCFD1Q8WVM8 642 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 BHMT2Q9H2M3 363 aa11.57□□□□□ -0.56
SAMM50-206ENST00000494795 FAM207AQ9NSI2 230 aaPredicted RBP11.57□□□□□ -0.56
SAMM50-206ENST00000494795 KCNJ6P48051 423 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 AMPD3Q01432 767 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 STIM1Q13586 685 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 MTMR2Q13614 643 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 HERC4Q5GLZ8 1057 aaPredicted RBP11.56□□□□□ -0.56
SAMM50-206ENST00000494795 ANKRD7Q92527 254 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 REEP2Q9BRK0 252 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 CRACR2AQ9BSW2 395 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 RANBP17Q9H2T7 1088 aaKnown RBP11.56□□□□□ -0.56
SAMM50-206ENST00000494795 CNOT7Q9UIV1 285 aaKnown RBP11.56□□□□□ -0.56
SAMM50-206ENST00000494795 DUSP10Q9Y6W6 482 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 MYL1P05976 194 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 GCFC2P16383 781 aaKnown RBP11.56□□□□□ -0.56
SAMM50-206ENST00000494795 CYP27A1Q02318 531 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 TRPM4Q8TD43 1214 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 RAB34Q9BZG1 259 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 TTYH3Q9C0H2 523 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 GOPCQ9HD26 462 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 BMP2KQ9NSY1 1161 aaPredicted RBP11.56□□□□□ -0.56
SAMM50-206ENST00000494795 MYBP10242 640 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 AP3B2Q13367 1082 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 KRT26Q7Z3Y9 468 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 TPH2Q8IWU9 490 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 EIF2AK1Q9BQI3 630 aaKnown RBP11.56□□□□□ -0.56
SAMM50-206ENST00000494795 WDR11Q9BZH6 1224 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 DEFB129Q9H1M3 183 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
SAMM50-206ENST00000494795 RIPK3Q9Y572 518 aa11.56□□□□□ -0.56
SAMM50-206ENST00000494795 ITIH6Q6UXX5 1313 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 PRPF6O94906 941 aaKnown RBP11.55□□□□□ -0.56
SAMM50-206ENST00000494795 ITGB5P18084 799 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 ARHGAP25P42331 645 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 ORC2Q13416 577 aaPredicted RBP11.55□□□□□ -0.56
SAMM50-206ENST00000494795 GIT2Q14161 759 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 Q4G0T1 1027 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 GRIPAP1Q4V328 841 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 FAM26FQ5R3K3 315 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 HYIQ5T013 277 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 MAEAQ7L5Y9 396 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 SFR1Q86XK3 245 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 DYDC2Q96IM9 177 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 PCMTD1Q96MG8 357 aaPredicted RBP11.55□□□□□ -0.56
SAMM50-206ENST00000494795 CARD6Q9BX69 1037 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 L2HGDHQ9H9P8 463 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 MAGEF1Q9HAY2 307 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 EEF1GP26641 437 aaKnown RBP11.55□□□□□ -0.56
SAMM50-206ENST00000494795 ZCWPW2Q504Y3 356 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 OTOP1Q7RTM1 612 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 HOOK2Q96ED9 719 aa11.55□□□□□ -0.56
SAMM50-206ENST00000494795 MAGEC2Q9UBF1 373 aaPredicted RBP11.55□□□□□ -0.56
SAMM50-206ENST00000494795 PVALEFA0A1B0GWK0 134 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 SORBS3O60504 671 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 SLITRK3O94933 977 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 TRIM21P19474 475 aaKnown RBP11.54□□□□□ -0.56
SAMM50-206ENST00000494795 TGFB2P61812 414 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 FAM83AQ86UY5 434 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 DNAAF5Q86Y56 855 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 MTMR14Q8NCE2 650 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 BANK1Q8NDB2 785 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 COL2A1P02458 1487 aaPredicted RBP11.54□□□□□ -0.56
SAMM50-206ENST00000494795 GCOM1H8Y6P7 765 aaPredicted RBP11.54□□□□□ -0.56
SAMM50-206ENST00000494795 TRAF5O00463 557 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 STK25O00506 426 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 ZNF263O14978 683 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 NRDCO43847 1150 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 POLR2MP0CAP2 368 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 ALAS1P13196 640 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 PTGER2P43116 358 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 SPAG1Q07617 926 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 SPP2Q13103 211 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 ZC2HC1CQ53FD0 456 aaPredicted RBP11.54□□□□□ -0.56
SAMM50-206ENST00000494795 CNGA4Q8IV77 575 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 GUF1Q8N442 669 aaKnown RBP11.54□□□□□ -0.56
SAMM50-206ENST00000494795 SLC16A10Q8TF71 515 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 CLEC4DQ8WXI8 215 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 SGIP1Q9BQI5 828 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 TANGO6Q9C0B7 1094 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms