RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 KIAA2012Q0VF49 1180 aa6.49□□□□□ -1.37
SMC4-224ENST00000494612 C2orf27AQ580R0 203 aa6.49□□□□□ -1.37
SMC4-224ENST00000494612 ZNF662Q6ZS27 426 aa6.49□□□□□ -1.37
SMC4-224ENST00000494612 TRIM59Q8IWR1 403 aa6.49□□□□□ -1.37
SMC4-224ENST00000494612 ZBTB38Q8NAP3 1195 aaPredicted RBP6.49□□□□□ -1.37
SMC4-224ENST00000494612 AARSD1Q9BTE6 412 aaKnown RBP6.49□□□□□ -1.37
SMC4-224ENST00000494612 IER2Q9BTL4 223 aa6.49□□□□□ -1.37
SMC4-224ENST00000494612 CYP26B1Q9NR63 512 aa6.49□□□□□ -1.37
SMC4-224ENST00000494612 MARCH2Q9P0N8 246 aa6.49□□□□□ -1.37
SMC4-224ENST00000494612 BLACEA4D250 179 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 C22orf46C9J442 243 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 ARNTLO00327 626 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 PPP1R12AO14974 1030 aaPredicted RBP6.48□□□□□ -1.37
SMC4-224ENST00000494612 THBDP07204 575 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 SLC6A11P48066 632 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 ITGA1P56199 1179 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 PRSS53Q2L4Q9 553 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 POMZP3Q6PJE2 187 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 CD300LDQ6UXZ3 194 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 SPRED1Q7Z699 444 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 TTLL6Q8N841 843 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 NPLOC4Q8TAT6 608 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 FRS2Q8WU20 508 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 SEC14L1Q92503 715 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 KISS1RQ969F8 398 aaPredicted RBP6.48□□□□□ -1.37
SMC4-224ENST00000494612 SGSM3Q96HU1 749 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 EXOC2Q96KP1 924 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 IPO9Q96P70 1041 aaKnown RBP6.48□□□□□ -1.37
SMC4-224ENST00000494612 AP5M1Q9H0R1 490 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 INVSQ9Y283 1065 aa6.48□□□□□ -1.37
SMC4-224ENST00000494612 MROH6A6NGR9 719 aa6.47□□□□□ -1.37
SMC4-224ENST00000494612 CDC45O75419 566 aa6.47□□□□□ -1.37
SMC4-224ENST00000494612 ASMTLO95671 621 aa6.47□□□□□ -1.37
SMC4-224ENST00000494612 SNRPB2P08579 225 aaKnown RBP6.47□□□□□ -1.37
SMC4-224ENST00000494612 NSMFQ6X4W1 530 aa6.47□□□□□ -1.37
SMC4-224ENST00000494612 STK32CQ86UX6 486 aa6.47□□□□□ -1.37
SMC4-224ENST00000494612 RIOX2Q8IUF8 465 aa6.47□□□□□ -1.37
SMC4-224ENST00000494612 TEX2Q8IWB9 1127 aa6.47□□□□□ -1.37
SMC4-224ENST00000494612 LGI4Q8N135 537 aa6.47□□□□□ -1.37
SMC4-224ENST00000494612 Q8N1Y9 231 aa6.47□□□□□ -1.37
SMC4-224ENST00000494612 TXNDC5Q8NBS9 432 aaKnown RBP6.47□□□□□ -1.37
SMC4-224ENST00000494612 APPBP2Q92624 585 aa6.47□□□□□ -1.37
SMC4-224ENST00000494612 ZNF669Q96BR6 464 aaPredicted RBP6.47□□□□□ -1.37
SMC4-224ENST00000494612 TRBV23-1A0A0A0MS06 115 aa6.46□□□□□ -1.38
SMC4-224ENST00000494612 PABPC1P11940 636 aaKnown RBP6.46□□□□□ -1.38
SMC4-224ENST00000494612 CR1LQ2VPA4 569 aa6.46□□□□□ -1.38
SMC4-224ENST00000494612 TKFCQ3LXA3 575 aa6.46□□□□□ -1.38
SMC4-224ENST00000494612 MCTP2Q6DN12 878 aa6.46□□□□□ -1.38
SMC4-224ENST00000494612 CRIP3Q6Q6R5 217 aa6.46□□□□□ -1.38
SMC4-224ENST00000494612 HOMER1Q86YM7 354 aa6.46□□□□□ -1.38
SMC4-224ENST00000494612 FAM126BQ8IXS8 530 aa6.46□□□□□ -1.38
SMC4-224ENST00000494612 Q8N1X5 172 aa6.46□□□□□ -1.38
SMC4-224ENST00000494612 CRACR2BQ8N4Y2 399 aaPredicted RBP6.46□□□□□ -1.38
SMC4-224ENST00000494612 ZSWIM2Q8NEG5 633 aa6.46□□□□□ -1.38
SMC4-224ENST00000494612 NKX2-4Q9H2Z4 354 aa6.46□□□□□ -1.38
SMC4-224ENST00000494612 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMC4-224ENST00000494612 X6R8D5 127 aa6.46□□□□□ -1.38
SMC4-224ENST00000494612 DDX3XO00571 662 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMC4-224ENST00000494612 DLX3O60479 287 aa6.45□□□□□ -1.38
SMC4-224ENST00000494612 GLB1LQ6UWU2 654 aa6.45□□□□□ -1.38
SMC4-224ENST00000494612 MILR1Q7Z6M3 343 aa6.45□□□□□ -1.38
SMC4-224ENST00000494612 ZC3H18Q86VM9 953 aaKnown RBP6.45□□□□□ -1.38
SMC4-224ENST00000494612 JMYQ8N9B5 988 aa6.45□□□□□ -1.38
SMC4-224ENST00000494612 TMEM145Q8NBT3 493 aa6.45□□□□□ -1.38
SMC4-224ENST00000494612 OSBP2Q969R2 916 aa6.45□□□□□ -1.38
SMC4-224ENST00000494612 DHRS4Q9BTZ2 278 aa6.45□□□□□ -1.38
SMC4-224ENST00000494612 TMEM260Q9NX78 707 aa6.45□□□□□ -1.38
SMC4-224ENST00000494612 ST6GALNAC2Q9UJ37 374 aa6.45□□□□□ -1.38
SMC4-224ENST00000494612 TIMM13Q9Y5L4 95 aaPredicted RBP6.45□□□□□ -1.38
SMC4-224ENST00000494612 ZNF536O15090 1300 aa6.45□□□□□ -1.38
SMC4-224ENST00000494612 HSD3B2P26439 372 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 ADAM9Q13443 819 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 MROH9Q5TGP6 573 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 EGFLAMQ63HQ2 1017 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 IQCEQ6IPM2 695 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 BORAQ6PGQ7 559 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 USP53Q70EK8 1073 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 FAM124AQ86V42 546 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 CCDC103Q8IW40 242 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 SCUBE1Q8IWY4 988 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 BTG4Q9NY30 223 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 TMEFF2Q9UIK5 374 aaPredicted RBP6.44□□□□□ -1.38
SMC4-224ENST00000494612 MRPS23Q9Y3D9 190 aaKnown RBP6.44□□□□□ -1.38
SMC4-224ENST00000494612 TSC22D4Q9Y3Q8 395 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 CD2APQ9Y5K6 639 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 SBNO2Q9Y2G9 1366 aa6.44□□□□□ -1.38
SMC4-224ENST00000494612 C9orf118A6NHY6 69 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 B4GALT3O60512 393 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 CLSTN1O94985 981 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 RAPGEF3O95398 923 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 FPR2P25090 351 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 HOXC12P31275 282 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 STAT5AP42229 794 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 GFRA1P56159 465 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 C16orf86Q6ZW13 317 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 CEP68Q76N32 757 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 LIMS2Q7Z4I7 341 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 NLRP10Q86W26 655 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 LCORQ96JN0 433 aaPredicted RBP6.43□□□□□ -1.38
SMC4-224ENST00000494612 CDK5RAP1Q96SZ6 601 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms