RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SH2B1Q9NRF2 756 aaPredicted RBP9.73□□□□□ -0.85
RIF1-211ENST00000494333 ECHDC1Q9NTX5 307 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 GINM1Q9NU53 330 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 MCM9Q9NXL9 1143 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 SRRDQ9UH36 339 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 ZBTB21Q9ULJ3 1066 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 C19orf81C9J6K1 198 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 GH2P01242 217 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 CDC27P30260 824 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 RRP1P56182 461 aaKnown RBP9.72□□□□□ -0.85
RIF1-211ENST00000494333 CERKLQ49MI3 558 aaPredicted RBP9.72□□□□□ -0.85
RIF1-211ENST00000494333 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
RIF1-211ENST00000494333 CACTIN-AS1Q8N1I8 211 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 LCORLQ8N3X6 602 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 RAET1EQ8TD07 263 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 FBF1Q8TES7 1133 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 ZNF333Q96JL9 665 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 TCF12Q99081 682 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 BHLHE41Q9C0J9 482 aaPredicted RBP9.72□□□□□ -0.85
RIF1-211ENST00000494333 ADAM19Q9H013 955 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 ASCC2Q9H1I8 757 aaPredicted RBP9.72□□□□□ -0.85
RIF1-211ENST00000494333 EHD4Q9H223 541 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 DCP1AQ9NPI6 582 aaPredicted RBP9.72□□□□□ -0.85
RIF1-211ENST00000494333 TMOD4Q9NZQ9 345 aa9.72□□□□□ -0.85
RIF1-211ENST00000494333 DOCK2Q92608 1830 aa9.71□□□□□ -0.85
RIF1-211ENST00000494333 METTL12A8MUP2 240 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 PRKAB2O43741 272 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 MBD4O95243 580 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 CHGBP05060 677 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 EN2P19622 333 aaPredicted RBP9.71□□□□□ -0.86
RIF1-211ENST00000494333 COL8A1P27658 744 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 GCLCP48506 637 aaPredicted RBP9.71□□□□□ -0.86
RIF1-211ENST00000494333 RAB3GAP1Q15042 981 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 UBE3CQ15386 1083 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 ABCB5Q2M3G0 1257 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 CCNJLQ8IV13 435 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 ASAP3Q8TDY4 903 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 CABP5Q9NP86 173 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 NOP53Q9NZM5 478 aaKnown RBP9.71□□□□□ -0.86
RIF1-211ENST00000494333 MYPNQ86TC9 1320 aa9.71□□□□□ -0.86
RIF1-211ENST00000494333 RNF225M0QZC1 329 aaPredicted RBP9.7□□□□□ -0.86
RIF1-211ENST00000494333 TNPO2O14787 897 aaKnown RBP9.7□□□□□ -0.86
RIF1-211ENST00000494333 HOXA7P31268 230 aaPredicted RBP9.7□□□□□ -0.86
RIF1-211ENST00000494333 GRK4P32298 578 aa9.7□□□□□ -0.86
RIF1-211ENST00000494333 SHMT1P34896 483 aa9.7□□□□□ -0.86
RIF1-211ENST00000494333 IRX3P78415 501 aaPredicted RBP9.7□□□□□ -0.86
RIF1-211ENST00000494333 PRKCZQ05513 592 aa9.7□□□□□ -0.86
RIF1-211ENST00000494333 GABPAQ06546 454 aa9.7□□□□□ -0.86
RIF1-211ENST00000494333 GRM2Q14416 872 aa9.7□□□□□ -0.86
RIF1-211ENST00000494333 FAM110CQ1W6H9 321 aa9.7□□□□□ -0.86
RIF1-211ENST00000494333 TSHZ3Q63HK5 1081 aa9.7□□□□□ -0.86
RIF1-211ENST00000494333 ZSCAN25Q6NSZ9 544 aa9.7□□□□□ -0.86
RIF1-211ENST00000494333 GPATCH3Q96I76 525 aa9.7□□□□□ -0.86
RIF1-211ENST00000494333 CRBNQ96SW2 442 aa9.7□□□□□ -0.86
RIF1-211ENST00000494333 P2RX7Q99572 595 aaKnown RBP9.7□□□□□ -0.86
RIF1-211ENST00000494333 GABRQQ9UN88 632 aa9.7□□□□□ -0.86
RIF1-211ENST00000494333 A0A0A0MRY4 1105 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 SPDYE3A6NKU9 549 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 MPHOSPH10O00566 681 aaKnown RBP9.69□□□□□ -0.86
RIF1-211ENST00000494333 CYP2D6P10635 497 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 EPHA1P21709 976 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 GRIA4P48058 902 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 FLT3LGP49771 235 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 ZYXQ15942 572 aaKnown RBP9.69□□□□□ -0.86
RIF1-211ENST00000494333 BSNDQ8WZ55 320 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 COA7Q96BR5 231 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 DYNLL2Q96FJ2 89 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 FEZ1Q99689 392 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 PUS7LQ9H0K6 701 aaKnown RBP9.69□□□□□ -0.86
RIF1-211ENST00000494333 ATP8A2Q9NTI2 1148 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 SOX13Q9UN79 622 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 PPME1Q9Y570 386 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 SLC4A4Q9Y6R1 1079 aa9.69□□□□□ -0.86
RIF1-211ENST00000494333 DOCK1Q14185 1865 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 MYO5AQ9Y4I1 1855 aaKnown RBP9.68□□□□□ -0.86
RIF1-211ENST00000494333 MAST2Q6P0Q8 1798 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 FAM229AH3BQW9 127 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 ADCY3O60266 1144 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 PRPF40AO75400 957 aaKnown RBP9.68□□□□□ -0.86
RIF1-211ENST00000494333 CDC25BP30305 580 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 USP14P54578 494 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 HERVK_113P62684 666 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 UBXN2AP68543 259 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 TAGLNQ01995 201 aaKnown RBP9.68□□□□□ -0.86
RIF1-211ENST00000494333 SEPT2Q15019 361 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 SPRED3Q2MJR0 410 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 C12orf60Q5U649 245 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 AMOTL1Q8IY63 956 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 KBTBD3Q8NAB2 608 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 SLC44A5Q8NCS7 719 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 GLIS3Q8NEA6 775 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 ACER1Q8TDN7 264 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 BCO2Q9BYV7 579 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 MUC3BQ9H195 1237 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 SWAP70Q9UH65 585 aa9.68□□□□□ -0.86
RIF1-211ENST00000494333 TTC41PQ6P2S7 1318 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 CYP2D7A0A087X1C5 515 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 A0A096LPE4 126 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 A0A1W2PPZ6 126 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 LINC01387J3KSC0 135 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms