RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 GGT7Q9UJ14 662 aa3.61□□□□□ -1.83
PTPN12-212ENST00000494248 TRBV23OR9-2A0A075B6M9 112 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 FOXN1O15353 648 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 CYP7B1O75881 506 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 ZNF888P0CJ79 500 aaPredicted RBP3.6□□□□□ -1.83
PTPN12-212ENST00000494248 MAKP20794 623 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 ACRV1P26436 265 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 TAGLNQ01995 201 aaKnown RBP3.6□□□□□ -1.83
PTPN12-212ENST00000494248 TCEAL1Q15170 157 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 RIOX2Q8IUF8 465 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 ARHGEF39Q8N4T4 335 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 RBBP8NLQ8NC74 664 aaPredicted RBP3.6□□□□□ -1.83
PTPN12-212ENST00000494248 GPR150Q8NGU9 434 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 COPS5Q92905 334 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 FGD4Q96M96 766 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 TMEM209Q96SK2 561 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 MMP19Q99542 508 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 HAUS7Q99871 368 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 YIPF4Q9BSR8 244 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 SLC2A4RGQ9NR83 387 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 CEP72Q9P209 647 aa3.6□□□□□ -1.83
PTPN12-212ENST00000494248 KNG1P01042 644 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 ERCC3P19447 782 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 PROZP22891 400 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 GUCY2CP25092 1073 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 MRPS21P82921 87 aaKnown RBP3.59□□□□□ -1.83
PTPN12-212ENST00000494248 AMPD2Q01433 879 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 CYP4F3Q08477 520 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 KIAA0825Q8IV33 1275 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 RPUSD2Q8IZ73 545 aaKnown RBP3.59□□□□□ -1.83
PTPN12-212ENST00000494248 Q8N1Y9 231 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 RNF34Q969K3 372 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 HECAQ9UBI9 543 aaPredicted RBP3.59□□□□□ -1.83
PTPN12-212ENST00000494248 FBXL7Q9UJT9 491 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 ZNF652Q9Y2D9 606 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 SLC30A1Q9Y6M5 507 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 X6R8D5 127 aa3.59□□□□□ -1.83
PTPN12-212ENST00000494248 MATN2O00339 956 aa3.58□□□□□ -1.84
PTPN12-212ENST00000494248 TADA3O75528 432 aa3.58□□□□□ -1.84
PTPN12-212ENST00000494248 ZC3H6P61129 1189 aaKnown RBP3.58□□□□□ -1.84
PTPN12-212ENST00000494248 GRB10Q13322 594 aa3.58□□□□□ -1.84
PTPN12-212ENST00000494248 MRPL58Q14197 206 aaKnown RBP3.58□□□□□ -1.84
PTPN12-212ENST00000494248 NOLC1Q14978 699 aaKnown RBP eCLIP3.58□□□□□ -1.84
PTPN12-212ENST00000494248 RNF151Q2KHN1 245 aa3.58□□□□□ -1.84
PTPN12-212ENST00000494248 COLEC12Q5KU26 742 aa3.58□□□□□ -1.84
PTPN12-212ENST00000494248 MROH9Q5TGP6 573 aa3.58□□□□□ -1.84
PTPN12-212ENST00000494248 ZKSCAN2Q63HK3 967 aa3.58□□□□□ -1.84
PTPN12-212ENST00000494248 POLNQ7Z5Q5 900 aa3.58□□□□□ -1.84
PTPN12-212ENST00000494248 ZNF513Q8N8E2 541 aaPredicted RBP3.58□□□□□ -1.84
PTPN12-212ENST00000494248 DPYSL5Q9BPU6 564 aa3.58□□□□□ -1.84
PTPN12-212ENST00000494248 SPON2Q9BUD6 331 aa3.58□□□□□ -1.84
PTPN12-212ENST00000494248 KATNBL1Q9H079 304 aa3.58□□□□□ -1.84
PTPN12-212ENST00000494248 ZNF703Q9H7S9 590 aaPredicted RBP3.58□□□□□ -1.84
PTPN12-212ENST00000494248 EPHX1P07099 455 aa3.57□□□□□ -1.84
PTPN12-212ENST00000494248 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
PTPN12-212ENST00000494248 PAPD7Q5XG87 772 aaKnown RBP3.57□□□□□ -1.84
PTPN12-212ENST00000494248 CEP68Q76N32 757 aa3.57□□□□□ -1.84
PTPN12-212ENST00000494248 PRRX2Q99811 253 aa3.57□□□□□ -1.84
PTPN12-212ENST00000494248 PCDHB10Q9UN67 800 aa3.57□□□□□ -1.84
PTPN12-212ENST00000494248 HGSO14964 777 aaPredicted RBP3.56□□□□□ -1.84
PTPN12-212ENST00000494248 CR2P20023 1033 aa3.56□□□□□ -1.84
PTPN12-212ENST00000494248 BCL6P41182 706 aa3.56□□□□□ -1.84
PTPN12-212ENST00000494248 SCRN1Q12765 414 aa3.56□□□□□ -1.84
PTPN12-212ENST00000494248 FSTL1Q12841 308 aa3.56□□□□□ -1.84
PTPN12-212ENST00000494248 SMAD2Q15796 467 aaKnown RBP3.56□□□□□ -1.84
PTPN12-212ENST00000494248 ADAT2Q7Z6V5 191 aaKnown RBP3.56□□□□□ -1.84
PTPN12-212ENST00000494248 CCDC103Q8IW40 242 aa3.56□□□□□ -1.84
PTPN12-212ENST00000494248 DTX3Q8N9I9 347 aa3.56□□□□□ -1.84
PTPN12-212ENST00000494248 FRS2Q8WU20 508 aa3.56□□□□□ -1.84
PTPN12-212ENST00000494248 RCC1LQ96I51 464 aaKnown RBP3.56□□□□□ -1.84
PTPN12-212ENST00000494248 FERD3LQ96RJ6 166 aa3.56□□□□□ -1.84
PTPN12-212ENST00000494248 WRNIP1Q96S55 665 aa3.56□□□□□ -1.84
PTPN12-212ENST00000494248 GBP3Q9H0R5 595 aa3.56□□□□□ -1.84
PTPN12-212ENST00000494248 OAZ3Q9UMX2 235 aa3.56□□□□□ -1.84
PTPN12-212ENST00000494248 INO80B-WBP1J3KQ70 363 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 MASP2O00187 686 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 C21orf58P58505 322 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 RAC3P60763 192 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 FOXL1Q12952 345 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 LAIR1Q6GTX8 287 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 FAM89AQ96GI7 184 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 OR14A2Q96R54 314 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 PLA2G12BQ9BX93 195 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 INO80BQ9C086 356 aaPredicted RBP3.55□□□□□ -1.84
PTPN12-212ENST00000494248 PHAXQ9H814 394 aaKnown RBP3.55□□□□□ -1.84
PTPN12-212ENST00000494248 HSPBP1Q9NZL4 362 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 REXO2Q9Y3B8 237 aaKnown RBP3.55□□□□□ -1.84
PTPN12-212ENST00000494248 PCDHB4Q9Y5E5 795 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 SLC12A7Q9Y666 1083 aa3.55□□□□□ -1.84
PTPN12-212ENST00000494248 H0Y858 1186 aa3.54□□□□□ -1.84
PTPN12-212ENST00000494248 PPM1BO75688 479 aa3.54□□□□□ -1.84
PTPN12-212ENST00000494248 IL18BPO95998 194 aa3.54□□□□□ -1.84
PTPN12-212ENST00000494248 ZNF37AP17032 561 aaPredicted RBP3.54□□□□□ -1.84
PTPN12-212ENST00000494248 SLC25A3Q00325 362 aa3.54□□□□□ -1.84
PTPN12-212ENST00000494248 HEATR6Q6AI08 1181 aaKnown RBP3.54□□□□□ -1.84
PTPN12-212ENST00000494248 IFNL2Q8IZJ0 200 aa3.54□□□□□ -1.84
PTPN12-212ENST00000494248 STPG3Q8N7X2 389 aa3.54□□□□□ -1.84
PTPN12-212ENST00000494248 C19orf47Q8N9M1 422 aaKnown RBP3.54□□□□□ -1.84
PTPN12-212ENST00000494248 NPLOC4Q8TAT6 608 aa3.54□□□□□ -1.84
PTPN12-212ENST00000494248 TRMT2BQ96GJ1 504 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms