RNA–Protein interactions for RNA: ENST00000494146.5

PTK7-219, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 4

Gene PTK7, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-219ENST00000494146 UPF3AQ9H1J1 476 aaKnown RBP11.32□□□□□ -0.6
PTK7-219ENST00000494146 RBSNQ9H1K0 784 aa11.32□□□□□ -0.6
PTK7-219ENST00000494146 CLSTN2Q9H4D0 955 aa11.32□□□□□ -0.6
PTK7-219ENST00000494146 C11orf49Q9H6J7 331 aa11.32□□□□□ -0.6
PTK7-219ENST00000494146 DDX41Q9UJV9 622 aaKnown RBP11.32□□□□□ -0.6
PTK7-219ENST00000494146 KCNJ14Q9UNX9 436 aa11.32□□□□□ -0.6
PTK7-219ENST00000494146 SYNRGQ9UMZ2 1314 aa11.32□□□□□ -0.6
PTK7-219ENST00000494146 A0A1W2PQ27 194 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 A0A1W2PQ64 194 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 A0A1W2PQD8 194 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 MOXD2PA6NHM9 499 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 SPATA31C2B4DYI2 1134 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 ARIH2O95376 493 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 GH1P01241 217 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 CYP3A4P08684 503 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 CST5P28325 142 aaPredicted RBP11.31□□□□□ -0.6
PTK7-219ENST00000494146 CPT1AP50416 773 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 ARHGAP4P98171 946 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 LY6KQ17RY6 165 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 GNASQ5JWF2 1037 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 RBM43Q6ZSC3 357 aaKnown RBP11.31□□□□□ -0.6
PTK7-219ENST00000494146 KRT25Q7Z3Z0 450 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 DHX37Q8IY37 1157 aaKnown RBP11.31□□□□□ -0.6
PTK7-219ENST00000494146 KLHDC9Q8NEP7 349 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 GPRASP2Q96D09 838 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 PAWRQ96IZ0 340 aaKnown RBP11.31□□□□□ -0.6
PTK7-219ENST00000494146 PDLIM2Q96JY6 352 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 MXRA8Q9BRK3 442 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 TNMDQ9H2S6 317 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 JADE2Q9NQC1 790 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 UBIAD1Q9Y5Z9 338 aa11.31□□□□□ -0.6
PTK7-219ENST00000494146 M0R2N6 131 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 ADAMTS3O15072 1205 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 ITGB5P18084 799 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 KRT2P35908 639 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 USP11P51784 963 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 MTMR1Q13613 665 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 LAMC2Q13753 1193 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 GNL2Q13823 731 aaKnown RBP11.3□□□□□ -0.6
PTK7-219ENST00000494146 NEDD9Q14511 834 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 NONOQ15233 471 aaKnown RBP eCLIP11.3□□□□□ -0.6
PTK7-219ENST00000494146 SAFBQ15424 915 aaKnown RBP eCLIP11.3□□□□□ -0.6
PTK7-219ENST00000494146 NPY5RQ15761 445 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 KCNA10Q16322 511 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 CEP55Q53EZ4 464 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 TMEM63BQ5T3F8 832 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 MYSM1Q5VVJ2 828 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 KRT40Q6A162 431 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 CCSAPQ6IQ19 270 aaPredicted RBP11.3□□□□□ -0.6
PTK7-219ENST00000494146 UBE2Q1Q7Z7E8 422 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 GIMAP8Q8ND71 665 aaPredicted RBP11.3□□□□□ -0.6
PTK7-219ENST00000494146 RASGRP4Q8TDF6 673 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 COPS5Q92905 334 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 SENP7Q9BQF6 1050 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 HTATIP2Q9BUP3 242 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 SENP6Q9GZR1 1112 aaPredicted RBP11.3□□□□□ -0.6
PTK7-219ENST00000494146 MLXIPQ9HAP2 919 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 GJB4Q9NTQ9 266 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 LCTP09848 1927 aa11.3□□□□□ -0.6
PTK7-219ENST00000494146 RBBP6Q7Z6E9 1792 aaKnown RBP11.3□□□□□ -0.6
PTK7-219ENST00000494146 KIAA0100Q14667 2235 aaKnown RBP11.29□□□□□ -0.6
PTK7-219ENST00000494146 CCDC194A0A1B0GVG4 234 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 A6NJR5 290 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 KPNA6O60684 536 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 CABYRO75952 493 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 MMP1P03956 469 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 COL6A1P12109 1028 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 CIITAP33076 1130 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 ACLYP53396 1101 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 BEX3Q00994 111 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 FAM160A1Q05DH4 1040 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 STK38Q15208 465 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 FSCN1Q16658 493 aaKnown RBP11.29□□□□□ -0.6
PTK7-219ENST00000494146 CELF3Q5SZQ8 465 aaKnown RBP11.29□□□□□ -0.6
PTK7-219ENST00000494146 FAM173BQ6P4H8 233 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 NIPA1Q7RTP0 329 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 TBCKQ8TEA7 893 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 DIS3LQ8TF46 1054 aaKnown RBP11.29□□□□□ -0.6
PTK7-219ENST00000494146 CRYGNQ8WXF5 182 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 EMID1Q96A84 441 aaPredicted RBP11.29□□□□□ -0.6
PTK7-219ENST00000494146 USP28Q96RU2 1077 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 FUCA2Q9BTY2 467 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 PHF24Q9UPV7 400 aa11.29□□□□□ -0.6
PTK7-219ENST00000494146 MYADML2A6NDP7 307 aa11.28□□□□□ -0.6
PTK7-219ENST00000494146 MEIS1O00470 390 aa11.28□□□□□ -0.6
PTK7-219ENST00000494146 KINO60870 393 aaKnown RBP11.28□□□□□ -0.6
PTK7-219ENST00000494146 GGPS1O95749 300 aa11.28□□□□□ -0.6
PTK7-219ENST00000494146 ASGR1P07306 291 aa11.28□□□□□ -0.6
PTK7-219ENST00000494146 UBA1P22314 1058 aaKnown RBP11.28□□□□□ -0.6
PTK7-219ENST00000494146 FOSBP53539 338 aa11.28□□□□□ -0.6
PTK7-219ENST00000494146 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
PTK7-219ENST00000494146 SP2Q02086 613 aa11.28□□□□□ -0.6
PTK7-219ENST00000494146 ARHGAP1Q07960 439 aa11.28□□□□□ -0.6
PTK7-219ENST00000494146 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
PTK7-219ENST00000494146 DIS3L2Q8IYB7 885 aaKnown RBP11.28□□□□□ -0.6
PTK7-219ENST00000494146 FAM200AQ8TCP9 573 aa11.28□□□□□ -0.6
PTK7-219ENST00000494146 MRPS27Q92552 414 aaKnown RBP11.28□□□□□ -0.6
PTK7-219ENST00000494146 FERMT2Q96AC1 680 aa11.28□□□□□ -0.6
PTK7-219ENST00000494146 VTI1AQ96AJ9 217 aa11.28□□□□□ -0.6
PTK7-219ENST00000494146 GLT1D1Q96MS3 346 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms