RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 UBA1P22314 1058 aaKnown RBP16.82■□□□□ 0.28
ACTB-213ENST00000493945 ADCYAP1R1P41586 468 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 TXKP42681 527 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 CPT1AP50416 773 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 SLC39A14Q15043 492 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 ZNF746Q6NUN9 644 aaPredicted RBP16.82■□□□□ 0.28
ACTB-213ENST00000493945 TAPT1Q6NXT6 567 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 KRI1Q8N9T8 703 aaKnown RBP16.82■□□□□ 0.28
ACTB-213ENST00000493945 ETNPPLQ8TBG4 499 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 NEK9Q8TD19 979 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 LENG9Q96B70 501 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 AK8Q96MA6 479 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 KATNBL1Q9H079 304 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 SLC9A2Q9UBY0 812 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 DDX41Q9UJV9 622 aaKnown RBP16.82■□□□□ 0.28
ACTB-213ENST00000493945 SAMM50Q9Y512 469 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 WDR64B1ANS9 1081 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 RGS20O76081 388 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 ARP10275 920 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 KCNA2P16389 499 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 ME1P48163 572 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 CAP1Q01518 475 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 NBR1Q14596 966 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 FAM173BQ6P4H8 233 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 TLK2Q86UE8 772 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 LINC00301Q8NCQ3 95 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 OR6J1Q8NGC5 347 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 CYP2W1Q8TAV3 490 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 TNPO1Q92973 898 aaKnown RBP16.81■□□□□ 0.28
ACTB-213ENST00000493945 EMID1Q96A84 441 aaPredicted RBP16.81■□□□□ 0.28
ACTB-213ENST00000493945 TTC12Q9H892 705 aaPredicted RBP16.81■□□□□ 0.28
ACTB-213ENST00000493945 PKD2L1Q9P0L9 805 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 DDX20Q9UHI6 824 aaKnown RBP16.81■□□□□ 0.28
ACTB-213ENST00000493945 CLIC4Q9Y696 253 aa16.81■□□□□ 0.28
ACTB-213ENST00000493945 ELP1O95163 1332 aa16.8■□□□□ 0.28
ACTB-213ENST00000493945 SLC26A4O43511 780 aa16.8■□□□□ 0.28
ACTB-213ENST00000493945 LONP1P36776 959 aaKnown RBP16.8■□□□□ 0.28
ACTB-213ENST00000493945 FXR2P51116 673 aaKnown RBP eCLIP16.8■□□□□ 0.282e-53■■□□□ 12.2
ACTB-213ENST00000493945 PPP2R5CQ13362 524 aa16.8■□□□□ 0.28
ACTB-213ENST00000493945 CELF3Q5SZQ8 465 aaKnown RBP16.8■□□□□ 0.28
ACTB-213ENST00000493945 MIS18BP1Q6P0N0 1132 aa16.8■□□□□ 0.28
ACTB-213ENST00000493945 CCDC62Q6P9F0 684 aa16.8■□□□□ 0.28
ACTB-213ENST00000493945 MIER3Q7Z3K6 550 aa16.8■□□□□ 0.28
ACTB-213ENST00000493945 RASSF8Q8NHQ8 419 aa16.8■□□□□ 0.28
ACTB-213ENST00000493945 SH3TC2Q8TF17 1288 aa16.8■□□□□ 0.28
ACTB-213ENST00000493945 ZFP91Q96JP5 570 aaPredicted RBP16.8■□□□□ 0.28
ACTB-213ENST00000493945 SPATA33Q96N06 139 aa16.8■□□□□ 0.28
ACTB-213ENST00000493945 MTMR9Q96QG7 549 aa16.8■□□□□ 0.28
ACTB-213ENST00000493945 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.8■□□□□ 0.282e-17■■■■□ 19.8
ACTB-213ENST00000493945 AZI2Q9H6S1 392 aa16.8■□□□□ 0.28
ACTB-213ENST00000493945 KDM3AQ9Y4C1 1321 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 VWA3AA6NCI4 1184 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 KPNA6O60684 536 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 FARP2O94887 1054 aaPredicted RBP16.79■□□□□ 0.28
ACTB-213ENST00000493945 PSAPP07602 524 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 PDIA5Q14554 519 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 LY6KQ17RY6 165 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 PRAMEF19Q5SWL8 479 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 FAM160B1Q5W0V3 765 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 KRT79Q5XKE5 535 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 CYFIP1Q7L576 1253 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 RNF180Q86T96 592 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 PPTC7Q8NI37 304 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 ARMC5Q96C12 935 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 CDK5RAP3Q96JB5 506 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 PYM1Q9BRP8 204 aaKnown RBP16.79■□□□□ 0.28
ACTB-213ENST00000493945 PDGFCQ9NRA1 345 aa16.79■□□□□ 0.28
ACTB-213ENST00000493945 TFIP11Q9UBB9 837 aaKnown RBP16.79■□□□□ 0.28
ACTB-213ENST00000493945 ZNF215Q9UL58 517 aaPredicted RBP16.79■□□□□ 0.28
ACTB-213ENST00000493945 LOXHD1Q8IVV2 1947 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 DDX39AO00148 427 aaKnown RBP16.78■□□□□ 0.28
ACTB-213ENST00000493945 CUTAO60888 179 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 PSMD10O75832 226 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 SMPD1P17405 629 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 PTMSP20962 102 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 SEMA3FQ13275 785 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 PTPAQ15257 358 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 DGKDQ16760 1214 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 NCAPH2Q6IBW4 605 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 PCSK9Q8NBP7 692 aaKnown RBP16.78■□□□□ 0.28
ACTB-213ENST00000493945 ARRDC4Q8NCT1 418 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 LEO1Q8WVC0 666 aaPredicted RBP16.78■□□□□ 0.28
ACTB-213ENST00000493945 SEPT1Q8WYJ6 367 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 HAS1Q92839 578 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 ATP6V0A1Q93050 837 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 CCDC34Q96HJ3 373 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 TMEM106CQ9BVX2 250 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 RNF208Q9H0X6 261 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 TMEM60Q9H2L4 133 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 XPNPEP3Q9NQH7 507 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 FAM13BQ9NYF5 915 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 LRWD1Q9UFC0 647 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 RCOR1Q9UKL0 485 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 PCDHA10Q9Y5I2 948 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 SRPRBQ9Y5M8 271 aaKnown RBP16.78■□□□□ 0.28
ACTB-213ENST00000493945 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
ACTB-213ENST00000493945 DOCK5Q9H7D0 1870 aa16.78■□□□□ 0.28
ACTB-213ENST00000493945 FRMPD3Q5JV73 1810 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 MYH9P35579 1960 aaKnown RBP16.77■□□□□ 0.28
ACTB-213ENST00000493945 BACH1O14867 736 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms