RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 NR1D1P20393 614 aa8.46□□□□□ -1.05
BRCA1-221ENST00000493795 COPB1P53618 953 aaKnown RBP8.46□□□□□ -1.05
BRCA1-221ENST00000493795 MORF4L2Q15014 288 aa8.46□□□□□ -1.05
BRCA1-221ENST00000493795 EXOC8Q8IYI6 725 aa8.46□□□□□ -1.05
BRCA1-221ENST00000493795 TTLL11Q8NHH1 800 aa8.46□□□□□ -1.05
BRCA1-221ENST00000493795 PAGR1Q9BTK6 254 aa8.46□□□□□ -1.05
BRCA1-221ENST00000493795 PPARGC1AQ9UBK2 798 aaKnown RBP8.46□□□□□ -1.05
BRCA1-221ENST00000493795 NOVA2Q9UNW9 492 aaKnown RBP8.46□□□□□ -1.05
BRCA1-221ENST00000493795 CSADQ9Y600 493 aa8.46□□□□□ -1.05
BRCA1-221ENST00000493795 PRG4Q92954 1404 aaPredicted RBP8.46□□□□□ -1.05
BRCA1-221ENST00000493795 SCAF11Q99590 1463 aaKnown RBP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 SEC31AO94979 1220 aaKnown RBP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 KRT75O95678 551 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 VCAM1P19320 739 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 SLC9A1P19634 815 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 TFAP4Q01664 338 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 MECOMQ03112 1051 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 UBE3AQ05086 875 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 FAM26FQ5R3K3 315 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 KRT39Q6A163 491 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 ELMSAN1Q6PJG2 1045 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 DPP8Q6V1X1 898 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 BZW1Q7L1Q6 419 aaKnown RBP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 LARGE2Q8N3Y3 721 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 PPP1R13BQ96KQ4 1090 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 SH3GL3Q99963 347 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 ZMYND12Q9H0C1 365 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 GINM1Q9NU53 330 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 EIF3DO15371 548 aaKnown RBP eCLIP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 SCG2P13521 617 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 DDX5P17844 614 aaKnown RBP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 C2orf54Q08AI8 447 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 LBRQ14739 615 aaKnown RBP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 NBPF20Q3BBV1 942 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 ARL13BQ3SXY8 428 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 RINLQ6ZS11 566 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 RRM2BQ7LG56 351 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 CADPS2Q86UW7 1296 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 ICA1LQ8NDH6 482 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 CNOT6LQ96LI5 555 aaKnown RBP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 KIF2CQ99661 725 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 DNAJC17Q9NVM6 304 aaKnown RBP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 SORBS3O60504 671 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 CA4P22748 312 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 PSMC2P35998 433 aaKnown RBP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 TRAPPC10P48553 1259 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 IGBP1P78318 339 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 TMPRSS15P98073 1019 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 SPARCL1Q14515 664 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 EFTUD2Q15029 972 aaKnown RBP eCLIP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 ADCK1Q86TW2 530 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 MAPKAPK5Q8IW41 473 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 SIX6OS1Q8N1H7 587 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 SLC35F6Q8N357 371 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 PPHLN1Q8NEY8 458 aaKnown RBP8.46□□□□□ -1.06
BRCA1-221ENST00000493795 PYROXD1Q8WU10 500 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 DTNBP1Q96EV8 351 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 EDEM3Q9BZQ6 932 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 SLC39A2Q9NP94 309 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 NDE1Q9NXR1 346 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 WIZO95785 1651 aa8.46□□□□□ -1.06
BRCA1-221ENST00000493795 A0A0G2JND7 137 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 GOLGA8SH3BPF8 625 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 COPEO14579 308 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 PDE8AO60658 829 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 KRT37O76014 449 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 RAPGEF3O95398 923 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 AFPP02771 609 aaKnown RBP8.45□□□□□ -1.06
BRCA1-221ENST00000493795 ABCD1P33897 745 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 DEPDC1Q5TB30 811 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 TTLL7Q6ZT98 887 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 PLA2G4DQ86XP0 818 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 NOSTRINQ8IVI9 506 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 TGFBRAP1Q8WUH2 860 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 NACC1Q96RE7 527 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 ZFP69BQ9UJL9 534 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 MAP3K5Q99683 1374 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 GNPATO15228 680 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 MYO1DO94832 1006 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 ZBED1O96006 694 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 KRT14P02533 472 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 ALAS1P13196 640 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 CDC25BP30305 580 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 TCP10Q12799 353 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 KRT72Q14CN4 511 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 BBS9Q3SYG4 887 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 C10orf76Q5T2E6 689 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 SMYD3Q9H7B4 428 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 LRRC4Q9HBW1 653 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 ATG3Q9NT62 314 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 GTSE1Q9NYZ3 720 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 SESN1Q9Y6P5 492 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 MSH6P52701 1360 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 CCDC151A5D8V7 595 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 GAP43P17677 238 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 NBPF9Q3BBW0 867 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 PODNQ7Z5L7 613 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 SPATA5Q8NB90 893 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 BTN2A2Q8WVV5 523 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms