RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 IFT20Q8IY31 132 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 CASKIN2Q8WXE0 1202 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 BMP2KQ9NSY1 1161 aaPredicted RBP17.16■□□□□ 0.34
CACUL1-206ENST00000493518 CHORDC1Q9UHD1 332 aaPredicted RBP17.16■□□□□ 0.34
CACUL1-206ENST00000493518 DUOX1Q9NRD9 1551 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 ADAM9Q13443 819 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 BAP1Q92560 729 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 PCDHA12Q9UN75 941 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 PCDHB13Q9Y5F0 798 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 TLDC2A0PJX2 215 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 POTEFA5A3E0 1075 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 POTEIP0CG38 1075 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 SHROOM1Q2M3G4 852 aaPredicted RBP17.15■□□□□ 0.34
CACUL1-206ENST00000493518 POTEGQ6S5H5 508 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 POTEEQ6S8J3 1075 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 DDX25Q9UHL0 483 aaKnown RBP17.15■□□□□ 0.34
CACUL1-206ENST00000493518 RTCBQ9Y3I0 505 aaKnown RBP17.15■□□□□ 0.34
CACUL1-206ENST00000493518 COL4A3BPQ9Y5P4 624 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 MYH3P11055 1940 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 ZNF233A6NK53 670 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 HGSO14964 777 aaPredicted RBP17.15■□□□□ 0.34
CACUL1-206ENST00000493518 TBC1D10BQ4KMP7 808 aaPredicted RBP17.15■□□□□ 0.34
CACUL1-206ENST00000493518 SH3GLB2Q9NR46 395 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 PLAAQ9Y263 795 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 TCP10Q12799 353 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 USH1GQ495M9 461 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 KSR1Q8IVT5 923 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 MMGT1Q8N4V1 131 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 RDH13Q8NBN7 331 aa17.15■□□□□ 0.34
CACUL1-206ENST00000493518 CELF4Q9BZC1 486 aaKnown RBP17.15■□□□□ 0.34
CACUL1-206ENST00000493518 EP400Q96L91 3159 aa17.14■□□□□ 0.33
CACUL1-206ENST00000493518 AKR1B1P15121 316 aa17.14■□□□□ 0.33
CACUL1-206ENST00000493518 SBK1Q52WX2 424 aa17.14■□□□□ 0.33
CACUL1-206ENST00000493518 EFCAB13Q8IY85 973 aa17.14■□□□□ 0.33
CACUL1-206ENST00000493518 RAD54LQ92698 747 aa17.14■□□□□ 0.33
CACUL1-206ENST00000493518 AK8Q96MA6 479 aa17.14■□□□□ 0.33
CACUL1-206ENST00000493518 GOLGA6L10A6NI86 522 aa17.14■□□□□ 0.33
CACUL1-206ENST00000493518 ANKRD2Q9GZV1 360 aa17.14■□□□□ 0.33
CACUL1-206ENST00000493518 A0A087WUV0 522 aaPredicted RBP17.13■□□□□ 0.33
CACUL1-206ENST00000493518 USP17L10C9JJH3 530 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 GTF2IP78347 998 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 HDLBPQ00341 1268 aaKnown RBP17.13■□□□□ 0.33
CACUL1-206ENST00000493518 FKBP3Q00688 224 aaKnown RBP17.13■□□□□ 0.33
CACUL1-206ENST00000493518 ASIC2Q16515 512 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 RAB34Q9BZG1 259 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 AMACRQ9UHK6 382 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 UBR2Q8IWV8 1755 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 GOLGA8KD6RF30 607 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 ITGA4P13612 1032 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 NR1D1P20393 614 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 NR2F2P24468 414 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 RPS6KA1Q15418 735 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 LRRC55Q6ZSA7 311 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 GRIN2DO15399 1336 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 FGFR1OPO95684 399 aaKnown RBP17.13■□□□□ 0.33
CACUL1-206ENST00000493518 CASP5P51878 434 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 SLC20A2Q08357 652 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 ZSCAN29Q8IWY8 852 aaPredicted RBP17.13■□□□□ 0.33
CACUL1-206ENST00000493518 PURBQ96QR8 312 aaKnown RBP17.13■□□□□ 0.33
CACUL1-206ENST00000493518 CCDC113Q9H0I3 377 aa17.13■□□□□ 0.33
CACUL1-206ENST00000493518 PARP4Q9UKK3 1724 aaKnown RBP17.12■□□□□ 0.33
CACUL1-206ENST00000493518 TMEM110-MUSTN1A8MSY1 372 aa17.12■□□□□ 0.33
CACUL1-206ENST00000493518 CHMP2AO43633 222 aa17.12■□□□□ 0.33
CACUL1-206ENST00000493518 PTK2Q05397 1052 aa17.12■□□□□ 0.33
CACUL1-206ENST00000493518 PAK2Q13177 524 aa17.12■□□□□ 0.33
CACUL1-206ENST00000493518 HGSNATQ68CP4 663 aa17.12■□□□□ 0.33
CACUL1-206ENST00000493518 MAEAQ7L5Y9 396 aa17.12■□□□□ 0.33
CACUL1-206ENST00000493518 WDR66Q8TBY9 1149 aa17.12■□□□□ 0.33
CACUL1-206ENST00000493518 KCNH2Q12809 1159 aa17.12■□□□□ 0.33
CACUL1-206ENST00000493518 NBPF9Q3BBW0 867 aa17.12■□□□□ 0.33
CACUL1-206ENST00000493518 CHADLQ6NUI6 762 aa17.12■□□□□ 0.33
CACUL1-206ENST00000493518 GUF1Q8N442 669 aaKnown RBP17.12■□□□□ 0.33
CACUL1-206ENST00000493518 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
CACUL1-206ENST00000493518 LAD1O00515 517 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 LSP1P33241 339 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 CTNNA1P35221 906 aaKnown RBP17.11■□□□□ 0.33
CACUL1-206ENST00000493518 FLT3P36888 993 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 KCNA1Q09470 495 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 PRR16Q569H4 304 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 DDX60Q8IY21 1712 aaKnown RBP17.11■□□□□ 0.33
CACUL1-206ENST00000493518 RPS6KA5O75582 802 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 NOL4O94818 638 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 PDHBP11177 359 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 PRPHP41219 470 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 PSMC6P62333 389 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 ZNF211Q13398 564 aaPredicted RBP17.11■□□□□ 0.33
CACUL1-206ENST00000493518 EMBQ6PCB8 327 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 U2AF1L4Q8WU68 220 aaKnown RBP17.11■□□□□ 0.33
CACUL1-206ENST00000493518 DAPK3O43293 454 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 MYL1P05976 194 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 UBXN2AP68543 259 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 CUEDC2Q9H467 287 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 EMILIN3Q9NT22 766 aa17.11■□□□□ 0.33
CACUL1-206ENST00000493518 RSPH10B2B2RC85 870 aa17.1■□□□□ 0.33
CACUL1-206ENST00000493518 PLA2G4BP0C869 781 aa17.1■□□□□ 0.33
CACUL1-206ENST00000493518 RSPH10BP0C881 870 aa17.1■□□□□ 0.33
CACUL1-206ENST00000493518 RFC4P35249 363 aa17.1■□□□□ 0.33
CACUL1-206ENST00000493518 JPH2Q9BR39 696 aaPredicted RBP17.1■□□□□ 0.33
CACUL1-206ENST00000493518 LOC102724159A0A0B4J2E5 919 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms