RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 MXI1P50539 228 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 EPHB4P54760 987 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 SGO2Q562F6 1265 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 ZNF449Q6P9G9 518 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 SKA2Q8WVK7 121 aaPredicted RBP17.67■□□□□ 0.42
BRAT1-206ENST00000493232 PBKQ96KB5 322 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 TTC1Q99614 292 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 EVI5O60447 810 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 KRT1P04264 644 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 EP400NLQ6ZTU2 488 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 UHMK1Q8TAS1 419 aaKnown RBP17.67■□□□□ 0.42
BRAT1-206ENST00000493232 COA7Q96BR5 231 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 GCNT4Q9P109 453 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 CPP00450 1065 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 SH3BGRP55822 239 aaPredicted RBP17.67■□□□□ 0.42
BRAT1-206ENST00000493232 DPCR1Q3MIW9 517 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 CLEC4GQ6UXB4 293 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 TAB3Q8N5C8 712 aaPredicted RBP17.67■□□□□ 0.42
BRAT1-206ENST00000493232 NLRP7Q8WX94 980 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 SUN1O94901 812 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 PLA2G4BP0C869 781 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.66■□□□□ 0.42
BRAT1-206ENST00000493232 ATP8B1O43520 1251 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 ZBED6P86452 979 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 MMEL1Q495T6 779 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 CIAPIN1Q6FI81 312 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 DGKHQ86XP1 1220 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 UBE2Q2Q8WVN8 375 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.66■□□□□ 0.427e-6■■■■■ 27.5
BRAT1-206ENST00000493232 PGBD1Q96JS3 809 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 LRRC4Q9HBW1 653 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 CPSF3Q9UKF6 684 aaKnown RBP17.66■□□□□ 0.42
BRAT1-206ENST00000493232 PTPN22Q9Y2R2 807 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 BCAS4Q8TDM0 211 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 BRIP1Q9BX63 1249 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 ANGPTL3Q9Y5C1 460 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 CDK12Q9NYV4 1490 aaPredicted RBP17.66■□□□□ 0.42
BRAT1-206ENST00000493232 POC1B-GALNT4F8VUJ3 575 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 USP17L8P0C7I0 530 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 ACTN1P12814 892 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 MECOMQ03112 1051 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 LRRC63Q05C16 580 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 CFAP61Q8NHU2 1237 aa17.66■□□□□ 0.42
BRAT1-206ENST00000493232 KDM5CP41229 1560 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 AP3B2Q13367 1082 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 USP17L2Q6R6M4 530 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 RAPH1Q70E73 1250 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 ARMCX2Q7L311 632 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 EFCAB13Q8IY85 973 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 INTS9Q9NV88 658 aaKnown RBP17.65■□□□□ 0.42
BRAT1-206ENST00000493232 ZSWIM5Q9P217 1185 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 GOLGA8SH3BPF8 625 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 CLIC2O15247 247 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 RFC1P35251 1148 aaPredicted RBP17.65■□□□□ 0.42
BRAT1-206ENST00000493232 STX1BP61266 288 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 MTERF2Q49AM1 385 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 SLFN12LQ6IEE8 588 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 TMEM179Q6ZVK1 233 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 CAPN7Q9Y6W3 813 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 SERPING1P05155 500 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 PCIF1Q9H4Z3 704 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 PHLPP2Q6ZVD8 1323 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 CDK8P49336 464 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 NR5A1Q13285 461 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 GBP5Q96PP8 586 aa17.65■□□□□ 0.42
BRAT1-206ENST00000493232 LRRN2O75325 713 aa17.64■□□□□ 0.42
BRAT1-206ENST00000493232 TTC4O95801 387 aa17.64■□□□□ 0.42
BRAT1-206ENST00000493232 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.42
BRAT1-206ENST00000493232 DALRD3Q5D0E6 543 aaKnown RBP17.64■□□□□ 0.42
BRAT1-206ENST00000493232 CCNYQ8ND76 341 aa17.64■□□□□ 0.42
BRAT1-206ENST00000493232 DCAF4Q8WV16 495 aa17.64■□□□□ 0.42
BRAT1-206ENST00000493232 EEF2KMTQ96G04 330 aa17.64■□□□□ 0.42
BRAT1-206ENST00000493232 PNMA3Q9UL41 463 aa17.64■□□□□ 0.42
BRAT1-206ENST00000493232 RAD17O75943 681 aa17.64■□□□□ 0.41
BRAT1-206ENST00000493232 ARHGEF18Q6ZSZ5 1173 aa17.64■□□□□ 0.41
BRAT1-206ENST00000493232 UBE2TQ9NPD8 197 aaPredicted RBP17.64■□□□□ 0.41
BRAT1-206ENST00000493232 NCAPD2Q15021 1401 aa17.64■□□□□ 0.41
BRAT1-206ENST00000493232 MEIS1O00470 390 aa17.64■□□□□ 0.41
BRAT1-206ENST00000493232 KIAA1841Q6NSI8 718 aa17.64■□□□□ 0.41
BRAT1-206ENST00000493232 SIX6OS1Q8N1H7 587 aa17.64■□□□□ 0.41
BRAT1-206ENST00000493232 LRGUKQ96M69 825 aa17.64■□□□□ 0.41
BRAT1-206ENST00000493232 ABCA8O94911 1581 aa17.64■□□□□ 0.41
BRAT1-206ENST00000493232 HEXIM1O94992 359 aaKnown RBP17.64■□□□□ 0.41
BRAT1-206ENST00000493232 PLCG1P19174 1290 aa17.64■□□□□ 0.41
BRAT1-206ENST00000493232 RASGRF1Q13972 1273 aa17.64■□□□□ 0.41
BRAT1-206ENST00000493232 PDXDC2PQ6P474 469 aa17.64■□□□□ 0.41
BRAT1-206ENST00000493232 SMYD4Q8IYR2 804 aaPredicted RBP17.64■□□□□ 0.41
BRAT1-206ENST00000493232 DYNLL2Q96FJ2 89 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 ROBO2Q9HCK4 1378 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 GFPT2O94808 682 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 MSH2P43246 934 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 RC3H1Q5TC82 1133 aaKnown RBP17.63■□□□□ 0.41
BRAT1-206ENST00000493232 FAM133AQ8N9E0 248 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 MASTLQ96GX5 879 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 SPATA31E1Q6ZUB1 1445 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 FAM8A1Q9UBU6 413 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 NXF1Q9UBU9 619 aaKnown RBP17.63■□□□□ 0.41
BRAT1-206ENST00000493232 PALLDQ8WX93 1383 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 SLC8A1P32418 973 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 JAK3P52333 1124 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms