RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 FERMT1Q9BQL6 677 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 CNTNAP5Q8WYK1 1306 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 RPN1P04843 607 aaKnown RBP6.94□□□□□ -1.3
NF1-215ENST00000493220 RESTQ13127 1097 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 CEP55Q53EZ4 464 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 KRBA2Q6ZNG9 492 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 AMIGO3Q86WK7 504 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 CSGALNACT2Q8N6G5 542 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 AOPEPQ8N6M6 819 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 ARRDC4Q8NCT1 418 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 ACER1Q8TDN7 264 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 GOLGA1Q92805 767 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 ERCC3P19447 782 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 SCP2P22307 547 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 CYP4A11Q02928 519 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 EPHA7Q15375 998 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 DGKDQ16760 1214 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 NOL9Q5SY16 702 aaKnown RBP6.94□□□□□ -1.3
NF1-215ENST00000493220 SLFN12LQ6IEE8 588 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.94□□□□□ -1.3
NF1-215ENST00000493220 CACTINQ8WUQ7 758 aaKnown RBP6.94□□□□□ -1.3
NF1-215ENST00000493220 NELFBQ8WX92 580 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 ALS2CR12Q96Q35 445 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 NOC4LQ9BVI4 516 aaKnown RBP6.94□□□□□ -1.3
NF1-215ENST00000493220 SPATC1LQ9H0A9 340 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 IPO5O00410 1097 aaKnown RBP6.93□□□□□ -1.3
NF1-215ENST00000493220 TOMM70O94826 608 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 LARGE1O95461 756 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 PRPHP41219 470 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 QARSP47897 775 aaKnown RBP6.93□□□□□ -1.3
NF1-215ENST00000493220 UBXN1Q04323 297 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 NR5A1Q13285 461 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 CATSPERGQ6ZRH7 1159 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 FAM81BQ96LP2 452 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 ASCC2Q9H1I8 757 aaPredicted RBP6.93□□□□□ -1.3
NF1-215ENST00000493220 METTL14Q9HCE5 456 aaKnown RBP6.93□□□□□ -1.3
NF1-215ENST00000493220 TMEM260Q9NX78 707 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 PCDHA7Q9UN72 937 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 PCDHA10Q9Y5I2 948 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 TOGARAM1Q9Y4F4 1720 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 ROBO3Q96MS0 1386 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 TFRCP02786 760 aaKnown RBP6.93□□□□□ -1.3
NF1-215ENST00000493220 ARHGAP29Q52LW3 1261 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 FBXL16Q8N461 479 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 EHBP1Q8NDI1 1231 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 KLRG1Q96E93 195 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 NUP58Q9BVL2 599 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 PDGFDQ9GZP0 370 aaPredicted RBP6.93□□□□□ -1.3
NF1-215ENST00000493220 DISC1Q9NRI5 854 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 GOLGA6L9A6NEM1 432 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 CA12O43570 354 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 PLA2G6O60733 806 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 EIF3JO75822 258 aaKnown RBP6.93□□□□□ -1.3
NF1-215ENST00000493220 NR3C2P08235 984 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 PLA2G4BP0C869 781 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 CYLC1P35663 651 aaPredicted RBP6.93□□□□□ -1.3
NF1-215ENST00000493220 PCSK9Q8NBP7 692 aaKnown RBP6.93□□□□□ -1.3
NF1-215ENST00000493220 MXRA8Q9BRK3 442 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 MKRN1Q9UHC7 482 aaKnown RBP6.93□□□□□ -1.3
NF1-215ENST00000493220 CPA4Q9UI42 421 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 VWA5AO00534 786 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 SEMA3FQ13275 785 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 ARMCX5Q6P1M9 558 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 MOXD1Q6UVY6 613 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 TMC6Q7Z403 805 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 FAM43AQ8N2R8 423 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 CCDC112Q8NEF3 446 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 ANKRD36BP1Q96IX9 119 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 AGBL1Q96MI9 1066 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 NOX5Q96PH1 765 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 ZMYND12Q9H0C1 365 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 EFCC1Q9HA90 598 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 PARVGQ9HBI0 331 aa6.93□□□□□ -1.3
NF1-215ENST00000493220 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.93□□□□□ -1.3
NF1-215ENST00000493220 UBR2Q8IWV8 1755 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 RRN3P2A6NIE6 340 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 RFC5P40937 340 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 FAM26FQ5R3K3 315 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 TATDN1Q6P1N9 297 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 FILIP1Q7Z7B0 1213 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 SHCBP1Q8NEM2 672 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 LRRC45Q96CN5 670 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 GCOM2Q9BZD3 368 aaPredicted RBP6.92□□□□□ -1.3
NF1-215ENST00000493220 FTOQ9C0B1 505 aaKnown RBP eCLIP6.92□□□□□ -1.3
NF1-215ENST00000493220 DNAJC25Q9H1X3 360 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 BLZF1Q9H2G9 400 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 CPVLQ9H3G5 476 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 TBC1D7Q9P0N9 293 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 SLC15A5A6NIM6 579 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 SPDYE5A6NIY4 337 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 KIF2AO00139 706 aaPredicted RBP6.92□□□□□ -1.3
NF1-215ENST00000493220 BCRP11274 1271 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 MARK3P27448 753 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 PTGER2P43116 358 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 ERVK-9P63128 1117 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 ERVK-24P63145 666 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 PPP2R3AQ06190 1150 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 RIOX2Q8IUF8 465 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 CLEC10AQ8IUN9 316 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 LINC00301Q8NCQ3 95 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms