RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 CYB5D2Q8WUJ1 264 aa8.48□□□□□ -1.05
TPR-208ENST00000492973 CCDC136Q96JN2 1154 aa8.48□□□□□ -1.05
TPR-208ENST00000492973 DDX60Q8IY21 1712 aaKnown RBP8.47□□□□□ -1.05
TPR-208ENST00000492973 ANKRD18BA2A2Z9 1011 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 CHURC1-FNTBB4DL54 471 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 IGHDP01880 384 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 CEACAM5P06731 702 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 TCF3P15923 654 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 ZNF165P49910 485 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 PAK2Q13177 524 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 MTX1Q13505 466 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 GPR162Q16538 588 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 C22orf34Q6ZV56 151 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 ANKRD18AQ8IVF6 992 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 PLD6Q8N2A8 252 aaKnown RBP8.47□□□□□ -1.05
TPR-208ENST00000492973 NETO1Q8TDF5 533 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 PPP1R13LQ8WUF5 828 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 TGIF2Q9GZN2 237 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 BSDC1Q9NW68 430 aaPredicted RBP8.47□□□□□ -1.05
TPR-208ENST00000492973 KLHL3Q9UH77 587 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 PLAGL2Q9UPG8 496 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 HDAC5Q9UQL6 1122 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 ATP6V0A2Q9Y487 856 aa8.47□□□□□ -1.05
TPR-208ENST00000492973 SNED1Q8TER0 1413 aa8.46□□□□□ -1.05
TPR-208ENST00000492973 PNMA6EA0A0J9YXQ4 647 aa8.46□□□□□ -1.06
TPR-208ENST00000492973 SLC22A31A6NKX4 558 aa8.46□□□□□ -1.06
TPR-208ENST00000492973 IFIT5Q13325 482 aaKnown RBP8.46□□□□□ -1.06
TPR-208ENST00000492973 ZNF746Q6NUN9 644 aaPredicted RBP8.46□□□□□ -1.06
TPR-208ENST00000492973 CEP85Q6P2H3 762 aa8.46□□□□□ -1.06
TPR-208ENST00000492973 NFXL1Q6ZNB6 911 aa8.46□□□□□ -1.06
TPR-208ENST00000492973 GK5Q6ZS86 529 aa8.46□□□□□ -1.06
TPR-208ENST00000492973 CDH24Q86UP0 819 aa8.46□□□□□ -1.06
TPR-208ENST00000492973 SP8Q8IXZ3 490 aa8.46□□□□□ -1.06
TPR-208ENST00000492973 KLHDC4Q8TBB5 520 aa8.46□□□□□ -1.06
TPR-208ENST00000492973 CDC5LQ99459 802 aaKnown RBP8.46□□□□□ -1.06
TPR-208ENST00000492973 PUS3Q9BZE2 481 aaKnown RBP8.46□□□□□ -1.06
TPR-208ENST00000492973 TNKS2Q9H2K2 1166 aa8.46□□□□□ -1.06
TPR-208ENST00000492973 GMIPQ9P107 970 aa8.46□□□□□ -1.06
TPR-208ENST00000492973 TPX2Q9ULW0 747 aaKnown RBP8.46□□□□□ -1.06
TPR-208ENST00000492973 N4BP2Q86UW6 1770 aaPredicted RBP8.45□□□□□ -1.06
TPR-208ENST00000492973 ZNF865P0CJ78 1059 aaPredicted RBP8.45□□□□□ -1.06
TPR-208ENST00000492973 MCM4P33991 863 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 IGHMBP2P38935 993 aaKnown RBP8.45□□□□□ -1.06
TPR-208ENST00000492973 GJA8P48165 433 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 PRELPP51888 382 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 GPSM2P81274 684 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 ATP8B2P98198 1209 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 IFI16Q16666 785 aaKnown RBP8.45□□□□□ -1.06
TPR-208ENST00000492973 CCDC57Q2TAC2 916 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 CCDC93Q567U6 631 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 ARHGAP27Q6ZUM4 889 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 SIRT2Q8IXJ6 389 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 RPAP2Q8IXW5 612 aaPredicted RBP8.45□□□□□ -1.06
TPR-208ENST00000492973 RASGRP4Q8TDF6 673 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 RWDD1Q9H446 243 aaPredicted RBP8.45□□□□□ -1.06
TPR-208ENST00000492973 IGSF5Q9NSI5 407 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 CCDC39Q9UFE4 941 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 MINPP1Q9UNW1 487 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 CEP131Q9UPN4 1083 aa8.45□□□□□ -1.06
TPR-208ENST00000492973 PA2G4Q9UQ80 394 aaKnown RBP8.45□□□□□ -1.06
TPR-208ENST00000492973 LAMB2P55268 1798 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 WTIPA6NIX2 430 aaPredicted RBP8.44□□□□□ -1.06
TPR-208ENST00000492973 PRR33A8MZF0 331 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 SRGAP3O43295 1099 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 NKPD1Q17RQ9 610 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 LRRC24Q50LG9 513 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 TAF7LQ5H9L4 462 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 SFRP5Q5T4F7 317 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 SOGA3Q5TF21 947 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 VSIG10LQ86VR7 867 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 SPACA3Q8IXA5 215 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 SSH3Q8TE77 659 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 ZNRF3Q9ULT6 936 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 RIPOR2Q9Y4F9 1068 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 KDM2BQ8NHM5 1336 aa8.44□□□□□ -1.06
TPR-208ENST00000492973 DLEC1Q9Y238 1755 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 SLX4Q8IY92 1834 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 MEIS3P2A8K0S8 358 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 RBAK-RBAKDNI3L0D1 243 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 EYA2O00167 538 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 ITIH2P19823 946 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 ETV3P41162 512 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 CHRNDQ07001 517 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 HDAC1Q13547 482 aaPredicted RBP8.43□□□□□ -1.06
TPR-208ENST00000492973 CDCP2Q5VXM1 449 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 OVOS1Q6IE37 1185 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 DPP8Q6V1X1 898 aaPredicted RBP8.43□□□□□ -1.06
TPR-208ENST00000492973 LDHAL6AQ6ZMR3 332 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 ATG9AQ7Z3C6 839 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 WFDC3Q8IUB2 231 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 RTKN2Q8IZC4 609 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 TBC1D16Q8TBP0 767 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 GPRASP2Q96D09 838 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 COX4I2Q96KJ9 171 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 PSMD1Q99460 953 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 MPHOSPH8Q99549 860 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 RTFDC1Q9BY42 306 aaPredicted RBP8.43□□□□□ -1.06
TPR-208ENST00000492973 ACBD3Q9H3P7 528 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 POLLQ9UGP5 575 aa8.43□□□□□ -1.06
TPR-208ENST00000492973 LTBP3Q9NS15 1303 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms