RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 GOLGA8HP0CJ92 632 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 SNHG28P0DPA3 235 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 AVPR2P30518 371 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 RRP1P56182 461 aaKnown RBP14.1□□□□□ -0.15
GPNMB-214ENST00000492858 SIGLEC14Q08ET2 396 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 MYSM1Q5VVJ2 828 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 SMRP1Q8NCR6 262 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 APBB2Q92870 758 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 CLP1Q92989 425 aaKnown RBP14.1□□□□□ -0.15
GPNMB-214ENST00000492858 C16orf70Q9BSU1 422 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 TCP11L1Q9NUJ3 509 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 ABCB11O95342 1321 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 H0Y858 1186 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 CAND2O75155 1236 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 GGPS1O95749 300 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 NR3C2P08235 984 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 FGRP09769 529 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 SMIM10L2AP0DMW4 78 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 SMIM10L2BP0DMW5 78 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 HOXC8P31273 242 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 CBX2Q14781 532 aaPredicted RBP14.09□□□□□ -0.15
GPNMB-214ENST00000492858 CDC37Q16543 378 aaPredicted RBP14.09□□□□□ -0.15
GPNMB-214ENST00000492858 CELF3Q5SZQ8 465 aaKnown RBP14.09□□□□□ -0.15
GPNMB-214ENST00000492858 VPS53Q5VIR6 699 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 MCF2L2Q86YR7 1114 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 PPP2R3CQ969Q6 453 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 ASIC4Q96FT7 647 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 UBA5Q9GZZ9 404 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 MAF1Q9H063 256 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 PXMP2Q9NR77 195 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 TLR9Q9NR96 1032 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 CLEC1BQ9P126 229 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 RALGAPA2Q2PPJ7 1873 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 KMT2EQ8IZD2 1858 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 ATG2AQ2TAZ0 1938 aa14.09□□□□□ -0.15
GPNMB-214ENST00000492858 WDR87Q6ZQQ6 2873 aa14.08□□□□□ -0.16
GPNMB-214ENST00000492858 H3BRB1 525 aa14.08□□□□□ -0.16
GPNMB-214ENST00000492858 CAMK1Q14012 370 aa14.08□□□□□ -0.16
GPNMB-214ENST00000492858 BTG3Q14201 252 aaPredicted RBP14.08□□□□□ -0.16
GPNMB-214ENST00000492858 GPATCH4Q5T3I0 446 aaKnown RBP14.08□□□□□ -0.16
GPNMB-214ENST00000492858 ASCL5Q7RTU5 278 aa14.08□□□□□ -0.16
GPNMB-214ENST00000492858 ADGRD2Q7Z7M1 963 aa14.08□□□□□ -0.16
GPNMB-214ENST00000492858 RPGRIP1Q96KN7 1286 aa14.08□□□□□ -0.16
GPNMB-214ENST00000492858 CHMP4BQ9H444 224 aaKnown RBP14.08□□□□□ -0.16
GPNMB-214ENST00000492858 RNPEPQ9H4A4 650 aa14.08□□□□□ -0.16
GPNMB-214ENST00000492858 TUT1Q9H6E5 874 aaKnown RBP14.08□□□□□ -0.16
GPNMB-214ENST00000492858 USP15Q9Y4E8 981 aaPredicted RBP14.08□□□□□ -0.16
GPNMB-214ENST00000492858 PROB1E7EW31 1015 aa14.07□□□□□ -0.16
GPNMB-214ENST00000492858 KDM4AO75164 1064 aa14.07□□□□□ -0.16
GPNMB-214ENST00000492858 RGS20O76081 388 aa14.07□□□□□ -0.16
GPNMB-214ENST00000492858 MYCLP12524 364 aaPredicted RBP14.07□□□□□ -0.16
GPNMB-214ENST00000492858 COASYQ13057 564 aa14.07□□□□□ -0.16
GPNMB-214ENST00000492858 EFHBQ8N7U6 833 aa14.07□□□□□ -0.16
GPNMB-214ENST00000492858 TTC14Q96N46 770 aa14.07□□□□□ -0.16
GPNMB-214ENST00000492858 PHF7Q9BWX1 381 aaPredicted RBP14.07□□□□□ -0.16
GPNMB-214ENST00000492858 PLVAPQ9BX97 442 aa14.07□□□□□ -0.16
GPNMB-214ENST00000492858 RC3H2Q9HBD1 1191 aaKnown RBP14.07□□□□□ -0.16
GPNMB-214ENST00000492858 BARX2Q9UMQ3 279 aaPredicted RBP14.07□□□□□ -0.16
GPNMB-214ENST00000492858 PLAGL2Q9UPG8 496 aa14.07□□□□□ -0.16
GPNMB-214ENST00000492858 MRPL11Q9Y3B7 192 aaKnown RBP14.07□□□□□ -0.16
GPNMB-214ENST00000492858 KIAA1217Q5T5P2 1943 aa14.07□□□□□ -0.16
GPNMB-214ENST00000492858 CFBP00751 764 aa14.06□□□□□ -0.16
GPNMB-214ENST00000492858 HSPD1P10809 573 aaKnown RBP14.06□□□□□ -0.16
GPNMB-214ENST00000492858 GHRP10912 638 aa14.06□□□□□ -0.16
GPNMB-214ENST00000492858 UBA1P22314 1058 aaKnown RBP14.06□□□□□ -0.16
GPNMB-214ENST00000492858 DNAJB1P25685 340 aa14.06□□□□□ -0.16
GPNMB-214ENST00000492858 HNRNPUQ00839 825 aaKnown RBP eCLIP14.06□□□□□ -0.16
GPNMB-214ENST00000492858 SP2Q02086 613 aa14.06□□□□□ -0.16
GPNMB-214ENST00000492858 KCNV1Q6PIU1 500 aa14.06□□□□□ -0.16
GPNMB-214ENST00000492858 RBM23Q86U06 439 aaKnown RBP14.06□□□□□ -0.16
GPNMB-214ENST00000492858 ADGRF4Q8IZF3 695 aa14.06□□□□□ -0.16
GPNMB-214ENST00000492858 MLXIPQ9HAP2 919 aa14.06□□□□□ -0.16
GPNMB-214ENST00000492858 SETD4Q9NVD3 440 aa14.06□□□□□ -0.16
GPNMB-214ENST00000492858 RIF1Q5UIP0 2472 aaKnown RBP14.05□□□□□ -0.16
GPNMB-214ENST00000492858 PRR23AA6NEV1 266 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 GLP2RO95838 553 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 PDGFBP01127 241 aaPredicted RBP14.05□□□□□ -0.16
GPNMB-214ENST00000492858 LGALS2P05162 132 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 ITGB1P05556 798 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 GNAT1P11488 350 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 ICAM3P32942 547 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 NRIP1P48552 1158 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 ALX1Q15699 326 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 QRICH1Q2TAL8 776 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 FAM26DQ5JW98 314 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 ERMP1Q7Z2K6 904 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 MIER1Q8N108 512 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 PI4K2BQ8TCG2 481 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 P2RX5Q93086 422 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 ZNF689Q96CS4 500 aaPredicted RBP14.05□□□□□ -0.16
GPNMB-214ENST00000492858 PDCD2LQ9BRP1 358 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 TRPC6Q9Y210 931 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 TTC41PQ6P2S7 1318 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 CCDC171Q6TFL3 1326 aa14.05□□□□□ -0.16
GPNMB-214ENST00000492858 GALR2O43603 387 aaPredicted RBP14.04□□□□□ -0.16
GPNMB-214ENST00000492858 DHX16O60231 1041 aaKnown RBP14.04□□□□□ -0.16
GPNMB-214ENST00000492858 FGAP02671 866 aa14.04□□□□□ -0.16
GPNMB-214ENST00000492858 HAND2P61296 217 aa14.04□□□□□ -0.16
GPNMB-214ENST00000492858 PTPN21Q16825 1174 aa14.04□□□□□ -0.16
GPNMB-214ENST00000492858 SPPL3Q8TCT6 385 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms