RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.74□□□□□ -0.69
ERCC3-208ENST00000491292 SERPING1P05155 500 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 GJC1P36383 396 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 SCTRP47872 440 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 GLE1Q53GS7 698 aaKnown RBP10.74□□□□□ -0.69
ERCC3-208ENST00000491292 ALKBH5Q6P6C2 394 aaKnown RBP10.74□□□□□ -0.69
ERCC3-208ENST00000491292 HOOK3Q86VS8 718 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 REXO1Q8N1G1 1221 aaKnown RBP10.74□□□□□ -0.69
ERCC3-208ENST00000491292 NSMCE1Q8WV22 266 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 LMBR1Q8WVP7 490 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 DDX12PQ92771 950 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 STAMBPL1Q96FJ0 436 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 PSMD1Q99460 953 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 AZI2Q9H6S1 392 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 PANK4Q9NVE7 773 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 TBK1Q9UHD2 729 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 BCS1LQ9Y276 419 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 RICTORQ6R327 1708 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 A0A1W2PRG0 241 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 H2AFZP0C0S5 128 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 H2AFVQ71UI9 128 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 VSIG1Q86XK7 387 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 FUKQ8N0W3 1084 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 GLIS3Q8NEA6 775 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 FMO2Q99518 471 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 SEMA6BQ9H3T3 888 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 COL4A3BPQ9Y5P4 624 aa10.74□□□□□ -0.69
ERCC3-208ENST00000491292 DIP2AQ14689 1571 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 CNTNAP5Q8WYK1 1306 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 H0Y3Z8 333 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 CLIC2O15247 247 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 ITGA4P13612 1032 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 PICALMQ13492 652 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 AMFRQ9UKV5 643 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 LEMD3Q9Y2U8 911 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 SLIT1O75093 1534 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 GFPT2O94808 682 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 UPP2O95045 317 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 FSBPO95073 299 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 CSF1RP07333 972 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 ERVK-9P63128 1117 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 SEC23AQ15436 765 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 CCDC6Q16204 474 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 CDC37Q16543 378 aaPredicted RBP10.73□□□□□ -0.69
ERCC3-208ENST00000491292 SUSD4Q5VX71 490 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 CAPN12Q6ZSI9 719 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 CCDC105Q8IYK2 499 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 SHISA4Q96DD7 197 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 NOD2Q9HC29 1040 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 NOC2LQ9Y3T9 749 aaKnown RBP10.73□□□□□ -0.69
ERCC3-208ENST00000491292 MYMKA6NI61 221 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 KIF1CO43896 1103 aaKnown RBP10.73□□□□□ -0.69
ERCC3-208ENST00000491292 FLOT1O75955 427 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 PRDX5P30044 214 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 SKOR1P84550 965 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 FKBP3Q00688 224 aaKnown RBP10.73□□□□□ -0.69
ERCC3-208ENST00000491292 KRT25Q7Z3Z0 450 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 GPBP1Q86WP2 473 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 CHMP6Q96FZ7 201 aa10.73□□□□□ -0.69
ERCC3-208ENST00000491292 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.73□□□□□ -0.69
ERCC3-208ENST00000491292 DCDC2CA8MYV0 355 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 ERVV-2B6SEH9 535 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 F8W031 263 aaPredicted RBP10.72□□□□□ -0.69
ERCC3-208ENST00000491292 CHN1P15882 459 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 GCFC2P16383 781 aaKnown RBP10.72□□□□□ -0.69
ERCC3-208ENST00000491292 ATP11AP98196 1134 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 SEPT7Q16181 437 aaKnown RBP10.72□□□□□ -0.69
ERCC3-208ENST00000491292 MEA1Q16626 185 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 GRIPAP1Q4V328 841 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 NUGGCQ68CJ6 796 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 CCDC65Q8IXS2 484 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 PIGBQ92521 554 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 PIGSQ96S52 555 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 PRMT1Q99873 361 aaKnown RBP10.72□□□□□ -0.69
ERCC3-208ENST00000491292 MTRF1LQ9UGC7 380 aaKnown RBP10.72□□□□□ -0.69
ERCC3-208ENST00000491292 CHORDC1Q9UHD1 332 aaPredicted RBP10.72□□□□□ -0.69
ERCC3-208ENST00000491292 PCDHA6Q9UN73 950 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 KIAA1024Q9UPX6 916 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 PCDHA8Q9Y5H6 950 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 ABCC6O95255 1503 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 NPHP3-ACAD11A0A0J9YXS1 232 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 TRIM37O94972 964 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 PDHA1P08559 390 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 NR2F2P24468 414 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 ZNF76P36508 570 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 KCNB1Q14721 858 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 ACCSLQ4AC99 568 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 NAALADL2Q58DX5 795 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 CTTNBP2NLQ9P2B4 639 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 DAAM1Q9Y4D1 1078 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 ANKRD62A6NC57 917 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 DNM1LO00429 736 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 MEIS1O00470 390 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 USP38Q8NB14 1042 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 TMBIM4Q9HC24 238 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 RNF14Q9UBS8 474 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 RASAL2Q9UJF2 1139 aa10.72□□□□□ -0.69
ERCC3-208ENST00000491292 DBR1Q9UK59 544 aaKnown RBP10.72□□□□□ -0.69
ERCC3-208ENST00000491292 WDR17Q8IZU2 1322 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 ACSL3O95573 720 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms