RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 TCEANC2Q96MN5 208 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 ZBED2Q9BTP6 218 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 UBE2ZQ9H832 354 aaPredicted RBP9.92□□□□□ -0.82
HPS4-215ENST00000491142 PLSCR2Q9NRY7 297 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 LMCD1Q9NZU5 365 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 MTMR7Q9Y216 660 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 TET1Q8NFU7 2136 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 LCTP09848 1927 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 A6NJR5 290 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 NFIBO00712 420 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 NMT2O60551 498 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 ICAM1P05362 532 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 IL9P15248 144 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 GNAT2P19087 354 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 KCNA5P22460 613 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 SLC16A2P36021 539 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 KCNJ6P48051 423 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 HMGN5P82970 282 aaKnown RBP9.91□□□□□ -0.82
HPS4-215ENST00000491142 PTPN11Q06124 597 aaPredicted RBP9.91□□□□□ -0.82
HPS4-215ENST00000491142 PDE4BQ07343 736 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 ALX1Q15699 326 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 TCTN1Q2MV58 587 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 BRF1Q92994 677 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 UIMC1Q96RL1 719 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 CTAGE1Q96RT6 745 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 PANK2Q9BZ23 570 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 INCENPQ9NQS7 918 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 IL17RBQ9NRM6 502 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 ADD3Q9UEY8 706 aaKnown RBP9.91□□□□□ -0.82
HPS4-215ENST00000491142 STX8Q9UNK0 236 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 NOD1Q9Y239 953 aa9.91□□□□□ -0.82
HPS4-215ENST00000491142 COL4A4P53420 1690 aaPredicted RBP9.9□□□□□ -0.82
HPS4-215ENST00000491142 PTPRSQ13332 1948 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 PTPDC1A2A3K4 754 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 VPS37CA5D8V6 355 aaPredicted RBP9.9□□□□□ -0.82
HPS4-215ENST00000491142 KPNA6O60684 536 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 GADD45BO75293 160 aaPredicted RBP9.9□□□□□ -0.82
HPS4-215ENST00000491142 LETM1O95202 739 aaPredicted RBP9.9□□□□□ -0.82
HPS4-215ENST00000491142 FGAP02671 866 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 CALML3P27482 149 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 SSTR3P32745 418 aaPredicted RBP9.9□□□□□ -0.82
HPS4-215ENST00000491142 ERVK-21P61565 698 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 SCRN1Q12765 414 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 PPP2R5BQ15173 497 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 PTGISQ16647 500 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 LEXMQ3ZCV2 418 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 BRDTQ58F21 947 aaPredicted RBP9.9□□□□□ -0.82
HPS4-215ENST00000491142 TTBK2Q6IQ55 1244 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 GDF6Q6KF10 455 aaPredicted RBP9.9□□□□□ -0.82
HPS4-215ENST00000491142 SLC30A10Q6XR72 485 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 MB21D2Q8IYB1 491 aaPredicted RBP9.9□□□□□ -0.82
HPS4-215ENST00000491142 RGS22Q8NE09 1264 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 MARVELD3Q96A59 401 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 RAD9AQ99638 391 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 RANBP17Q9H2T7 1088 aaKnown RBP9.9□□□□□ -0.82
HPS4-215ENST00000491142 KIF3AQ9Y496 699 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 C5orf42Q9H799 3197 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 BRWD1Q9NSI6 2320 aa9.9□□□□□ -0.82
HPS4-215ENST00000491142 TRIOO75962 3097 aa9.9□□□□□ -0.83
HPS4-215ENST00000491142 SCN10AQ9Y5Y9 1956 aa9.9□□□□□ -0.83
HPS4-215ENST00000491142 LINC01553A4QN01 128 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 ZNF213O14771 459 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 NBNO60934 754 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 ARIH2O95376 493 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 GJB5O95377 273 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 TXNP10599 105 aaKnown RBP9.89□□□□□ -0.83
HPS4-215ENST00000491142 HOXB3P14651 431 aaPredicted RBP9.89□□□□□ -0.83
HPS4-215ENST00000491142 MCM5P33992 734 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 NASPP49321 788 aaPredicted RBP9.89□□□□□ -0.83
HPS4-215ENST00000491142 KRT85P78386 507 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 PPARAQ07869 468 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 PDE4DQ08499 809 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 CCDC173Q0VFZ6 552 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 STK3Q13188 491 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 CCDC96Q2M329 555 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 CCDC183Q5T5S1 534 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 PTCRAQ6ISU1 281 aaPredicted RBP9.89□□□□□ -0.83
HPS4-215ENST00000491142 FAM117BQ6P1L5 589 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 NSUN7Q8NE18 718 aaKnown RBP9.89□□□□□ -0.83
HPS4-215ENST00000491142 NCOA7Q8NI08 942 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 AFAP1L1Q8TED9 768 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 CLEC4DQ8WXI8 215 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 DHX38Q92620 1227 aaKnown RBP9.89□□□□□ -0.83
HPS4-215ENST00000491142 TGS1Q96RS0 853 aaKnown RBP9.89□□□□□ -0.83
HPS4-215ENST00000491142 PPP1R9BQ96SB3 815 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 ZSCAN16Q9H4T2 348 aaPredicted RBP9.89□□□□□ -0.83
HPS4-215ENST00000491142 TANC1Q9C0D5 1861 aa9.89□□□□□ -0.83
HPS4-215ENST00000491142 LOC102724159A0A0B4J2E5 919 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 TSPY2A6NKD2 308 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 NKRFO15226 690 aaKnown RBP eCLIP9.88□□□□□ -0.83
HPS4-215ENST00000491142 CXCL10P02778 98 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 SLC3A2P08195 630 aaKnown RBP9.88□□□□□ -0.83
HPS4-215ENST00000491142 ALADP13716 330 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 SELPP16109 830 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 EDNRBP24530 442 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 PDIA3P30101 505 aaKnown RBP9.88□□□□□ -0.83
HPS4-215ENST00000491142 FGD1P98174 961 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 NHLH1Q02575 133 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 DNM1Q05193 864 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms