RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SPIRE1Q08AE8 756 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 ZNF385BQ569K4 471 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 CIAPIN1Q6FI81 312 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 ZC3H7AQ8IWR0 971 aaKnown RBP7.79□□□□□ -1.16
CCDC39-206ENST00000489868 PHOSPHO1Q8TCT1 267 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 FNIP1Q8TF40 1166 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 FBXW5Q969U6 566 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 GORASP1Q9BQQ3 440 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 CD244Q9BZW8 370 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 FANCLQ9NW38 375 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 RBPJLQ9UBG7 517 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 FAN1Q9Y2M0 1017 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 COQ6Q9Y2Z9 468 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 TBX22Q9Y458 520 aa7.79□□□□□ -1.16
CCDC39-206ENST00000489868 CCDC66A2RUB6 948 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 DNAJC8O75937 253 aaPredicted RBP7.78□□□□□ -1.16
CCDC39-206ENST00000489868 PDE6AP16499 860 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 TUSC3Q13454 348 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 VMACQ2NL98 169 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 VWA3BQ502W6 1294 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 GIMAP6Q6P9H5 292 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 CD300LDQ6UXZ3 194 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 STK32CQ86UX6 486 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 OSTM1Q86WC4 334 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 NLGN1Q8N2Q7 840 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 MAGEB10Q96LZ2 347 aaPredicted RBP7.78□□□□□ -1.16
CCDC39-206ENST00000489868 SMURF1Q9HCE7 757 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 DTLQ9NZJ0 730 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 DSEQ9UL01 958 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 CD2APQ9Y5K6 639 aa7.78□□□□□ -1.16
CCDC39-206ENST00000489868 ZNF561-AS1K7EIQ3 104 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 RFXAPO00287 272 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 FFAR3O14843 346 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 CYP2C8P10632 490 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 SDSP20132 328 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 DNM2P50570 870 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 AFF3P51826 1226 aaKnown RBP7.77□□□□□ -1.17
CCDC39-206ENST00000489868 JAM2P57087 298 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 FNDC3BQ53EP0 1204 aaKnown RBP7.77□□□□□ -1.17
CCDC39-206ENST00000489868 FSTL4Q6MZW2 842 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 TEPPQ6URK8 271 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 C16orf59Q7L2K0 433 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 PTRH1Q86Y79 214 aaKnown RBP7.77□□□□□ -1.17
CCDC39-206ENST00000489868 ADGRG2Q8IZP9 1017 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 CATSPERZQ9NTU4 200 aa7.77□□□□□ -1.17
CCDC39-206ENST00000489868 MAN2B1O00754 1011 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 KCNK3O14649 394 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 EPHA5P54756 1037 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 PABPC4Q13310 644 aaKnown RBP eCLIP7.76□□□□□ -1.17
CCDC39-206ENST00000489868 ZNF460Q14592 562 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 GPR19Q15760 415 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 C21orf62-AS1Q17RA5 79 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 ARHGAP36Q6ZRI8 547 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 NOP9Q86U38 636 aaKnown RBP7.76□□□□□ -1.17
CCDC39-206ENST00000489868 PROSER1Q86XN7 944 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 KRTAP1-3Q8IUG1 177 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 CISD2Q8N5K1 135 aaKnown RBP7.76□□□□□ -1.17
CCDC39-206ENST00000489868 LINC00482Q8N8I6 264 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 TP53I13Q8NBR0 393 aaPredicted RBP7.76□□□□□ -1.17
CCDC39-206ENST00000489868 ZNF526Q8TF50 670 aaPredicted RBP7.76□□□□□ -1.17
CCDC39-206ENST00000489868 TOE1Q96GM8 510 aaKnown RBP7.76□□□□□ -1.17
CCDC39-206ENST00000489868 PDGFDQ9GZP0 370 aaPredicted RBP7.76□□□□□ -1.17
CCDC39-206ENST00000489868 SRPK3Q9UPE1 567 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 PMF1-BGLAPU3KQ54 211 aa7.76□□□□□ -1.17
CCDC39-206ENST00000489868 ACOT7O00154 380 aa7.75□□□□□ -1.17
CCDC39-206ENST00000489868 MAFKO60675 156 aa7.75□□□□□ -1.17
CCDC39-206ENST00000489868 ZSCAN22P10073 491 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-206ENST00000489868 NAT1P18440 290 aa7.75□□□□□ -1.17
CCDC39-206ENST00000489868 KRT15P19012 456 aa7.75□□□□□ -1.17
CCDC39-206ENST00000489868 THBS2P35442 1172 aa7.75□□□□□ -1.17
CCDC39-206ENST00000489868 ITGA1P56199 1179 aa7.75□□□□□ -1.17
CCDC39-206ENST00000489868 SMAD4Q13485 552 aaKnown RBP7.75□□□□□ -1.17
CCDC39-206ENST00000489868 RTP5Q14D33 572 aa7.75□□□□□ -1.17
CCDC39-206ENST00000489868 KCTD1Q719H9 257 aa7.75□□□□□ -1.17
CCDC39-206ENST00000489868 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-206ENST00000489868 HOMER1Q86YM7 354 aa7.75□□□□□ -1.17
CCDC39-206ENST00000489868 TTLL11Q8NHH1 800 aa7.75□□□□□ -1.17
CCDC39-206ENST00000489868 CELF4Q9BZC1 486 aaKnown RBP7.75□□□□□ -1.17
CCDC39-206ENST00000489868 SPATA6Q9NWH7 488 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-206ENST00000489868 TNPO3Q9Y5L0 923 aaKnown RBP7.75□□□□□ -1.17
CCDC39-206ENST00000489868 A0A1B0GTL3 188 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 ST5P78524 1137 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 LACTBP83111 547 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-206ENST00000489868 ADAM9Q13443 819 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 SEC23AQ15436 765 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 TM4SF20Q53R12 229 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 SPOCD1Q6ZMY3 1216 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 C16orf86Q6ZW13 317 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 OVCH1Q7RTY7 1134 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 SAPCD2Q86UD0 394 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 IGSF22Q8N9C0 903 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 APPBP2Q92624 585 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 ZBTB8AQ96BR9 441 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 YIPF4Q9BSR8 244 aa7.74□□□□□ -1.17
CCDC39-206ENST00000489868 C11orf84Q9BUA3 381 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-206ENST00000489868 FAM90A27PA6NNH2 459 aa7.73□□□□□ -1.17
CCDC39-206ENST00000489868 CDC45O75419 566 aa7.73□□□□□ -1.17
CCDC39-206ENST00000489868 RFPL3O75679 317 aa7.73□□□□□ -1.17
CCDC39-206ENST00000489868 TCERG1LQ5VWI1 586 aa7.73□□□□□ -1.17
CCDC39-206ENST00000489868 LIPIQ6XZB0 460 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms