RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 USP5P45974 858 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 TRAPPC10P48553 1259 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 HDLBPQ00341 1268 aaKnown RBP7.6□□□□□ -1.19
PDCD4-209ENST00000489049 DDR1Q08345 913 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 NAA30Q147X3 362 aaPredicted RBP7.6□□□□□ -1.19
PDCD4-209ENST00000489049 ZRSR1Q15695 479 aaKnown RBP7.6□□□□□ -1.19
PDCD4-209ENST00000489049 RRP12Q5JTH9 1297 aaKnown RBP7.6□□□□□ -1.19
PDCD4-209ENST00000489049 COL13A1Q5TAT6 717 aaPredicted RBP7.6□□□□□ -1.19
PDCD4-209ENST00000489049 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.6□□□□□ -1.19
PDCD4-209ENST00000489049 ADGRA1Q86SQ6 560 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 ZSCAN30Q86W11 494 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 AMIGO3Q86WK7 504 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 NOSTRINQ8IVI9 506 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 CCAR1Q8IX12 1150 aaKnown RBP7.6□□□□□ -1.19
PDCD4-209ENST00000489049 AGGF1Q8N302 714 aaeCLIP7.6□□□□□ -1.19
PDCD4-209ENST00000489049 ENAHQ8N8S7 591 aaPredicted RBP7.6□□□□□ -1.19
PDCD4-209ENST00000489049 ZNF384Q8TF68 577 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 PGBD1Q96JS3 809 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 USP28Q96RU2 1077 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 SLC26A6Q9BXS9 759 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 PANK2Q9BZ23 570 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 ZC3H12CQ9C0D7 883 aaKnown RBP7.6□□□□□ -1.19
PDCD4-209ENST00000489049 ANO10Q9NW15 660 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 MCM9Q9NXL9 1143 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 PPME1Q9Y570 386 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 CHD4Q14839 1912 aa7.6□□□□□ -1.19
PDCD4-209ENST00000489049 MYO5AQ9Y4I1 1855 aaKnown RBP7.6□□□□□ -1.19
PDCD4-209ENST00000489049 CASZ1Q86V15 1759 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 MYH13Q9UKX3 1938 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 GLB1P16278 677 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 LIG1P18858 919 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 CDC27P30260 824 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 DYNLL1P63167 89 aaKnown RBP7.59□□□□□ -1.19
PDCD4-209ENST00000489049 ATP11AP98196 1134 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 TROAPQ12815 778 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 HYAL2Q12891 473 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 STX1AQ16623 288 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 CT47A1Q5JQC4 288 aaPredicted RBP7.59□□□□□ -1.19
PDCD4-209ENST00000489049 HHIPL2Q6UWX4 724 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 ZNF444Q8N0Y2 327 aaPredicted RBP7.59□□□□□ -1.19
PDCD4-209ENST00000489049 GALNT11Q8NCW6 608 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 SUPT20HQ8NEM7 779 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 ENGASEQ8NFI3 743 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 SDR42E1Q8WUS8 393 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 CHAMP1Q96JM3 812 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 VPS33BQ9H267 617 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 MKNK2Q9HBH9 465 aa7.59□□□□□ -1.19
PDCD4-209ENST00000489049 AATFQ9NY61 560 aaKnown RBP eCLIP7.59□□□□□ -1.19
PDCD4-209ENST00000489049 NOL7Q9UMY1 257 aaKnown RBP7.59□□□□□ -1.19
PDCD4-209ENST00000489049 NRXN2Q9P2S2 1712 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 CARNS1A5YM72 827 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 TSPY2A6NKD2 308 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 H0YIN7 160 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 hCG_1984214I3L0E3 225 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 LINC01387J3KSC0 135 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 POLR3DP05423 398 aaPredicted RBP7.58□□□□□ -1.2
PDCD4-209ENST00000489049 KLRK1P26718 216 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 MMP14P50281 582 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 TPM4P67936 248 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 DPP8Q6V1X1 898 aaPredicted RBP7.58□□□□□ -1.2
PDCD4-209ENST00000489049 TMTC3Q6ZXV5 915 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.58□□□□□ -1.2
PDCD4-209ENST00000489049 TEX2Q8IWB9 1127 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 ZNF713Q8N859 430 aaPredicted RBP7.58□□□□□ -1.2
PDCD4-209ENST00000489049 FSIP1Q8NA03 581 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 CCDC12Q8WUD4 166 aaPredicted RBP7.58□□□□□ -1.2
PDCD4-209ENST00000489049 KRTAP4-12Q9BQ66 201 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 BPIFA3Q9BQP9 254 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 SDF4Q9BRK5 362 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 RTFDC1Q9BY42 306 aaPredicted RBP7.58□□□□□ -1.2
PDCD4-209ENST00000489049 KAT14Q9H8E8 782 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 SWAP70Q9UH65 585 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 PCDHA7Q9UN72 937 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 LRRC37AA6NMS7 1700 aa7.58□□□□□ -1.2
PDCD4-209ENST00000489049 TNRC6CQ9HCJ0 1690 aaKnown RBP7.57□□□□□ -1.2
PDCD4-209ENST00000489049 BRWD3Q6RI45 1802 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 TRIM75PA6NK02 468 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 TMEM88BA6NKF7 163 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 TSPY3P0CV98 308 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 TSPY8P0CW00 308 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 MSNP26038 577 aaKnown RBP7.57□□□□□ -1.2
PDCD4-209ENST00000489049 SCNN1AP37088 669 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 GUCY1B3Q02153 619 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 ORC2Q13416 577 aaPredicted RBP7.57□□□□□ -1.2
PDCD4-209ENST00000489049 SNW1Q13573 536 aaKnown RBP7.57□□□□□ -1.2
PDCD4-209ENST00000489049 MFSD14BQ5SR56 506 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 TMCO4Q5TGY1 634 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 CEP135Q66GS9 1140 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 FAM173BQ6P4H8 233 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 C16orf86Q6ZW13 317 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 COL23A1Q86Y22 540 aaPredicted RBP7.57□□□□□ -1.2
PDCD4-209ENST00000489049 DIS3L2Q8IYB7 885 aaKnown RBP7.57□□□□□ -1.2
PDCD4-209ENST00000489049 TEX11Q8IYF3 940 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 CEP57L1Q8IYX8 460 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 CCDC148Q8NFR7 591 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 NUP133Q8WUM0 1156 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 PHKBQ93100 1093 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 FERMT2Q96AC1 680 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 SPACA7Q96KW9 195 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 LACRTQ9GZZ8 138 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms