RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 PPM1HQ9ULR3 514 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 EXOC6BQ9Y2D4 811 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 GAKO14976 1311 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 MYH7P12883 1935 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 FOCADQ5VW36 1801 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 TCP10L2B9ZVM9 353 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 HYAL3O43820 417 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-207ENST00000488934 AOC2O75106 756 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 BAG3O95817 575 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 IFIT2P09913 472 aaKnown RBP6.2□□□□□ -1.42
SF3A3-207ENST00000488934 ZBTB48P10074 688 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-207ENST00000488934 MCAMP43121 646 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 CTCFP49711 727 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-207ENST00000488934 SREBF2Q12772 1141 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 TTF1Q15361 905 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-207ENST00000488934 APOBEC3HQ6NTF7 200 aaKnown RBP6.2□□□□□ -1.42
SF3A3-207ENST00000488934 NXPE4Q6UWF7 544 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 PI16Q6UXB8 463 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 SND1Q7KZF4 910 aaKnown RBP eCLIP6.2□□□□□ -1.42
SF3A3-207ENST00000488934 AACSQ86V21 672 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 ZDHHC13Q8IUH4 622 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 ANKRD13AQ8IZ07 590 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 FBLIM1Q8WUP2 373 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 FAM151AQ8WW52 585 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 GPATCH3Q96I76 525 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 LRRCC1Q9C099 1032 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 SAGE1Q9NXZ1 904 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 RAI14Q9P0K7 980 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 HMG20BQ9P0W2 317 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 ANGEL1Q9UNK9 670 aaKnown RBP6.2□□□□□ -1.42
SF3A3-207ENST00000488934 DAGLAQ9Y4D2 1042 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 MROH7-TTC4A0A0A0MT08 1334 aa6.2□□□□□ -1.42
SF3A3-207ENST00000488934 MYO5AQ9Y4I1 1855 aaKnown RBP6.19□□□□□ -1.42
SF3A3-207ENST00000488934 ENTPD3O75355 529 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 GSTP1P09211 210 aaKnown RBP6.19□□□□□ -1.42
SF3A3-207ENST00000488934 RAB6AP20340 208 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 BTDP43251 543 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 ASPAP45381 313 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 INHBEP58166 350 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 MECOMQ03112 1051 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 FAAP100Q0VG06 881 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 MAP3K12Q12852 859 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 COL19A1Q14993 1142 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 C20orf194Q5TEA3 1177 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 NAA16Q6N069 864 aaPredicted RBP6.19□□□□□ -1.42
SF3A3-207ENST00000488934 RASAL3Q86YV0 1011 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 SHKBP1Q8TBC3 707 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.19□□□□□ -1.42
SF3A3-207ENST00000488934 EZH1Q92800 747 aaPredicted RBP6.19□□□□□ -1.42
SF3A3-207ENST00000488934 EAF2Q96CJ1 260 aaPredicted RBP6.19□□□□□ -1.42
SF3A3-207ENST00000488934 IDI2Q9BXS1 227 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 OSBPL1AQ9BXW6 950 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 ATXN3LQ9H3M9 355 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 PIDD1Q9HB75 910 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 PRDM10Q9NQV6 1147 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 USP40Q9NVE5 1235 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 DBNLQ9UJU6 430 aaKnown RBP6.19□□□□□ -1.42
SF3A3-207ENST00000488934 SCAF8Q9UPN6 1271 aaKnown RBP6.19□□□□□ -1.42
SF3A3-207ENST00000488934 PCDHAC2Q9Y5I4 1007 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 CSADQ9Y600 493 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 ACTL7BQ9Y614 415 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 COL2A1P02458 1487 aaPredicted RBP6.19□□□□□ -1.42
SF3A3-207ENST00000488934 CDK5RAP2Q96SN8 1893 aa6.19□□□□□ -1.42
SF3A3-207ENST00000488934 SSC5DA1L4H1 1573 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 DOCK1Q14185 1865 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 GPR75-ASB3A0A0A6YYF3 556 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 MANSC4A6NHS7 340 aaPredicted RBP6.18□□□□□ -1.42
SF3A3-207ENST00000488934 FAM155AB1AL88 458 aaPredicted RBP6.18□□□□□ -1.42
SF3A3-207ENST00000488934 WDR64B1ANS9 1081 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 UBE2Q2LH0YL09 131 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 WDHD1O75717 1129 aaPredicted RBP6.18□□□□□ -1.42
SF3A3-207ENST00000488934 TGFB1P01137 390 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 CTSBP07858 339 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 SSTR4P31391 388 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 CD97P48960 835 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 CYP27A1Q02318 531 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 PRKG1Q13976 671 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 LDLRAD1Q5T700 205 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 NBPF12Q5TAG4 269 aaPredicted RBP6.18□□□□□ -1.42
SF3A3-207ENST00000488934 PRAMEF18Q5VWM3 479 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 OTUD7BQ6GQQ9 843 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 CDC42EP5Q6NZY7 148 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 DLK2Q6UY11 383 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 SULF2Q8IWU5 870 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 SIRT2Q8IXJ6 389 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 NSUN4Q96CB9 384 aaKnown RBP6.18□□□□□ -1.42
SF3A3-207ENST00000488934 MFSD14AQ96MC6 490 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 TEPSINQ96N21 525 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 WDR18Q9BV38 432 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 ZNF341Q9BYN7 854 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.18□□□□□ -1.427e-15■□□□□ 8.9
SF3A3-207ENST00000488934 TMEM39BQ9GZU3 492 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 CCDC8Q9H0W5 538 aaPredicted RBP6.18□□□□□ -1.42
SF3A3-207ENST00000488934 IL1RAPL2Q9NP60 686 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 FAM8A1Q9UBU6 413 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 RFX7Q2KHR2 1363 aa6.18□□□□□ -1.42
SF3A3-207ENST00000488934 PCNTO95613 3336 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 MYH1P12882 1939 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 FOXN1O15353 648 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 IDH1O75874 414 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms